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ZG16B zymogen granule protein 16B [ Homo sapiens (human) ]

Gene ID: 124220, updated on 25-Jan-2022

Summary

Official Symbol
ZG16Bprovided by HGNC
Official Full Name
zymogen granule protein 16Bprovided by HGNC
Primary source
HGNC:HGNC:30456
See related
Ensembl:ENSG00000162078 AllianceGenome:HGNC:30456
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
EECP; PAUF; JCLN2; HRPE773; PRO1567
Summary
Predicted to enable carbohydrate binding activity. Involved in retina homeostasis. Located in extracellular exosome. [provided by Alliance of Genome Resources, Nov 2021]
Expression
Restricted expression toward salivary gland (RPKM 15006.7) See more
Orthologs
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Genomic context

See ZG16B in Genome Data Viewer
Location:
16p13.3
Exon count:
4
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 16 NC_000016.10 (2830303..2832276)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 16 NC_000016.9 (2880304..2882277)

Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene serine protease 21 Neighboring gene eukaryotic translation initiation factor 1 pseudogene 4 Neighboring gene serine protease 30, pseudogene Neighboring gene serine protease 22

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
 
enables molecular_function ND
No biological Data available
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
involved_in retina homeostasis HEP PubMed 

General protein information

Preferred Names
zymogen granule protein 16 homolog B
Names
endocrine and exocrine protein
jacalin-like lectin domain containing 2
pancreatic adenocarcinoma upregulated factor

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_145252.3NP_660295.3  zymogen granule protein 16 homolog B precursor

    Status: VALIDATED

    Source sequence(s)
    AC005361
    Consensus CDS
    CCDS10479.2
    Related
    ENSP00000371715.4, ENST00000382280.8
    Conserved Domains (1) summary
    cd09611
    Location:21148
    Jacalin_ZG16_like; Jacalin-like lectin domain of the zymogen granule protein 16 and related proteins

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000016.10 Reference GRCh38.p13 Primary Assembly

    Range
    2830303..2832276
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p13 PATCHES

Genomic

  1. NW_013171812.1 Reference GRCh38.p13 PATCHES

    Range
    9768..11741
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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