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CP0117 IS600 ORF2 [ Shigella flexneri 2a str. 301 ]

Gene ID: 1238170, updated on 6-Oct-2023

Summary

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Gene symbol
CP0117
Gene description
IS600 ORF2
Locus tag
CP0117
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Shigella flexneri 2a str. 301 (strain: 301, serotype: 2a)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella
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Genomic context

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Location:
plasmid: pCP301
Sequence:
NC_004851.1 (97417..98151)

NC_004851.1Genomic Context describing neighboring genes Neighboring gene OspC3 Neighboring gene IS600 ORF1 Neighboring gene IS150 ORF B Neighboring gene transposase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_004851.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of Shigella flexneri 2a: insights into pathogenicity through comparison with genomes of Escherichia coli K12 and O157. Jin Q, et al. Nucleic Acids Res, 2002 Oct 15. PMID 12384590, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Names
IS600 ORF2

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004851.1 Reference assembly

    Range
    97417..98151
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_858250.1 IS600 ORF2 [Shigella flexneri 2a str. 301]

    See identical proteins and their annotated locations for NP_858250.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    D2AJH3
    Conserved Domains (4) summary
    COG2801
    Location:12 → 240
    Tra5; Transposase InsO and inactivated derivatives [Mobilome: prophages, transposons]
    pfam00665
    Location:81 → 193
    rve; Integrase core domain
    pfam13276
    Location:9 → 55
    HTH_21; HTH-like domain
    pfam13683
    Location:166 → 232
    rve_3; Integrase core domain
Nucleotide Protein
Heading Accession and Version

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