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MLPH melanophilin [ Neogale vison (American mink) ]

Gene ID: 122902450, updated on 22-Mar-2024

Summary

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Gene symbol
MLPH
Gene description
melanophilin
Gene type
protein coding
RefSeq status
MODEL
Organism
Neogale vison
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Neogale
Also known as
MELPH
Orthologs
human mouse all
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Genomic context

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See MLPH in Genome Data Viewer
Location:
chromosome: 3
Exon count:
16
Annotation release Status Assembly Chr Location
100 current ASM_NN_V1 (GCF_020171115.1) 3 NC_058093.1 (44484351..44528469)

Chromosome 3 - NC_058093.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene collagen type VI alpha 3 chain Neighboring gene prolactin releasing hormone Neighboring gene RAB17, member RAS oncogene family

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058093.1 Chromosome 3 Reference ASM_NN_V1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables myosin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables small GTPase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cortical actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
melanophilin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Neovison vison Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM_NN_V1 Primary Assembly

Genomic

  1. NC_058093.1 Reference ASM_NN_V1 Primary Assembly

    Range
    44484351..44528469
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044241916.1 → XP_044097851.1  melanophilin isoform X1

    UniProtKB/TrEMBL
    A0A8C7BR30
    Conserved Domains (1) summary
    cd15752
    Location:62 → 137
    FYVE_SlaC2-a; FYVE-related domain found in Slp homolog lacking C2 domains a (SlaC2-a) and similar proteins

  2. XM_044241917.1 → XP_044097852.1  melanophilin isoform X2

    UniProtKB/TrEMBL
    A0A8C7BR30
    Conserved Domains (1) summary
    cd15752
    Location:62 → 137
    FYVE_SlaC2-a; FYVE-related domain found in Slp homolog lacking C2 domains a (SlaC2-a) and similar proteins
Nucleotide Protein
Heading Accession and Version

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