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SPACA7 sperm acrosome associated 7 [ Homo sapiens (human) ]

Gene ID: 122258, updated on 11-Jun-2021

Summary

Official Symbol
SPACA7provided by HGNC
Official Full Name
sperm acrosome associated 7provided by HGNC
Primary source
HGNC:HGNC:29575
See related
Ensembl:ENSG00000153498
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
C13orf28
Expression
Restricted expression toward testis (RPKM 19.1) See more
Orthologs
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Genomic context

See SPACA7 in Genome Data Viewer
Location:
13q34
Exon count:
10
Annotation release Status Assembly Chr Location
109.20210514 current GRCh38.p13 (GCF_000001405.39) 13 NC_000013.11 (112376300..112434689)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 13 NC_000013.10 (113030669..113089003)

Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 1044 Neighboring gene uncharacterized LOC105370373 Neighboring gene uncharacterized LOC105370372 Neighboring gene tubulin gamma complex associated protein 3 Neighboring gene ATP11A upstream neighbor lncRNA

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • FLJ27356

Gene Ontology Provided by GOA

Process Evidence Code Pubs
involved_in single fertilization IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in acrosomal lumen IEA
Inferred from Electronic Annotation
more info
 
located_in acrosomal vesicle IDA
Inferred from Direct Assay
more info
PubMed 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
sperm acrosome-associated protein 7
Names
protein SPACA7

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_145248.5NP_660291.2  sperm acrosome-associated protein 7 precursor

    See identical proteins and their annotated locations for NP_660291.2

    Status: VALIDATED

    Source sequence(s)
    AI219896, AL160033, BC016750
    Consensus CDS
    CCDS9524.1
    UniProtKB/Swiss-Prot
    Q96KW9
    Related
    ENSP00000283550.3, ENST00000283550.8
    Conserved Domains (1) summary
    pfam15307
    Location:19125
    SPACA7; Sperm acrosome-associated protein 7

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210514

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000013.11 Reference GRCh38.p13 Primary Assembly

    Range
    112376300..112434689
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017020391.1XP_016875880.1  sperm acrosome-associated protein 7 isoform X7

  2. XM_011537472.2XP_011535774.1  sperm acrosome-associated protein 7 isoform X5

    See identical proteins and their annotated locations for XP_011535774.1

    Conserved Domains (1) summary
    pfam15307
    Location:36101
    SPACA7; Sperm acrosome-associated protein 7
  3. XM_011537466.1XP_011535768.1  sperm acrosome-associated protein 7 isoform X1

    See identical proteins and their annotated locations for XP_011535768.1

    Conserved Domains (1) summary
    pfam15307
    Location:36142
    SPACA7; Sperm acrosome-associated protein 7
  4. XM_011537467.2XP_011535769.1  sperm acrosome-associated protein 7 isoform X2

    See identical proteins and their annotated locations for XP_011535769.1

    Conserved Domains (1) summary
    pfam15307
    Location:36123
    SPACA7; Sperm acrosome-associated protein 7
  5. XM_024449318.1XP_024305086.1  sperm acrosome-associated protein 7 isoform X6

    Conserved Domains (1) summary
    pfam15307
    Location:36124
    SPACA7; Sperm acrosome-associated protein 7
  6. XM_017020392.1XP_016875881.1  sperm acrosome-associated protein 7 isoform X8

  7. XM_011537468.2XP_011535770.1  sperm acrosome-associated protein 7 isoform X3

    See identical proteins and their annotated locations for XP_011535770.1

    Conserved Domains (1) summary
    pfam15307
    Location:12111
    SPACA7; Sperm acrosome-associated protein 7
  8. XM_011537471.2XP_011535773.1  sperm acrosome-associated protein 7 isoform X4

    See identical proteins and their annotated locations for XP_011535773.1

    Conserved Domains (1) summary
    pfam15307
    Location:180
    SPACA7; Sperm acrosome-associated protein 7

Reference GRCh38.p13 ALT_REF_LOCI_1

Genomic

  1. NT_187592.1 Reference GRCh38.p13 ALT_REF_LOCI_1

    Range
    177325..235659
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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