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PRR20A proline rich 20A [ Homo sapiens (human) ]

Gene ID: 122183, updated on 5-Aug-2022

Summary

Official Symbol
PRR20Aprovided by HGNC
Official Full Name
proline rich 20Aprovided by HGNC
Primary source
HGNC:HGNC:24754
See related
Ensembl:ENSG00000204919 AllianceGenome:HGNC:24754
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
PRR20; PRR20B; PRR20C; PRR20D; PRR20E
Summary
This gene is one of five identical loci in a cluster on chromosome 13q21.1. The predicted protein is proline-rich and contains several dopamine D4 receptor signatures and PRINTS domains. [provided by RefSeq, Oct 2008]
Annotation information
Note: This gene is one of five identical loci in a cluster on chromosome 13q21.1. Similar gene clusters are suggested in rhesus, mouse, rabbit, dog, cow, platypus, and armadillo genomic sequences. [22 Jul 2008]
Expression
Low expression observed in reference dataset See more
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Genomic context

See PRR20A in Genome Data Viewer
Location:
13q21.1
Exon count:
3
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 13 NC_000013.11 (57140918..57143939)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 13 NC_060937.1 (56357788..56360807)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 13 NC_000013.10 (57715052..57718073)

Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene RN7SK pseudogene 6 Neighboring gene uncharacterized LOC124903235 Neighboring gene proline rich 20B Neighboring gene proline rich 20C

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General protein information

Preferred Names
proline-rich protein 20A
Names
Proline-rich protein 20B
Proline-rich protein 20C
Proline-rich protein 20D
Proline-rich protein 20E
proline rich 20
proline-rich protein 20

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_198441.2NP_940843.1  proline-rich protein 20A

    See identical proteins and their annotated locations for NP_940843.1

    Status: VALIDATED

    Source sequence(s)
    AL353652
    Consensus CDS
    CCDS31981.1
    UniProtKB/Swiss-Prot
    P86478, P86479, P86480, P86481, P86496, Q8N7V5
    Related
    ENSP00000367164.1, ENST00000377931.1
    Conserved Domains (1) summary
    pfam15708
    Location:1221
    PRR20; Proline-rich protein family 20

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000013.11 Reference GRCh38.p14 Primary Assembly

    Range
    57140918..57143939
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060937.1 Alternate T2T-CHM13v2.0

    Range
    56357788..56360807
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)