U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC121298788 cholesterol side-chain cleavage enzyme, mitochondrial-like [ Polyodon spathula (Mississippi paddlefish) ]

Gene ID: 121298788, updated on 7-Dec-2023
Gene symbol
LOC121298788
Gene description
cholesterol side-chain cleavage enzyme, mitochondrial-like
See related
EnsemblRapid:ENSPAHG00005006106
Gene type
protein coding
RefSeq status
MODEL
Organism
Polyodon spathula
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Chondrostei; Acipenseriformes; Polyodontidae; Polyodon
Try the new Gene page
Try the new Transcripts and proteins table
See LOC121298788 in Genome Data Viewer
Location:
chromosome: 24
Exon count:
9
Annotation release Status Assembly Chr Location
100 current ASM1765450v1 (GCF_017654505.1) 24 NC_054557.1 (7040362..7047697)

Chromosome 24 - NC_054557.1Genomic Context describing neighboring genes Neighboring gene protein PML-like Neighboring gene stomatin (EPB72)-like 1 Neighboring gene coiled-coil domain containing 33 Neighboring gene signaling receptor and transporter of retinol STRA6

Genomic Sequence:
NC_054557.1 Chromosome 24 Reference ASM1765450v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables monooxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in C21-steroid hormone biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to peptide hormone stimulus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cholesterol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cortisol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glucocorticoid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial inner membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
cholesterol side-chain cleavage enzyme, mitochondrial-like

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Polyodon spathula Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1765450v1 Primary Assembly

Genomic

  1. NC_054557.1 Reference ASM1765450v1 Primary Assembly

    Range
    7040362..7047697
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041226004.1 → XP_041081938.1  cholesterol side-chain cleavage enzyme, mitochondrial-like

    Related
    ENSPAHP00005008806.1, ENSPAHT00005009308.1
    Conserved Domains (1) summary
    COG2124
    Location:111 → 491
    CypX; Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism, Defense mechanisms]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases