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LOC119308544 glucan endo-1,3-beta-glucosidase 4-like [ Triticum dicoccoides ]

Gene ID: 119308544, updated on 14-Dec-2023

Summary

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Gene symbol
LOC119308544
Gene description
glucan endo-1,3-beta-glucosidase 4-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Triticum dicoccoides
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Genomic context

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See LOC119308544 in Genome Data Viewer
Location:
chromosome: 5B
Exon count:
9
Annotation release Status Assembly Chr Location
100 current WEW_v2.0 (GCF_002162155.1) 5B NC_041389.1 (297186363..297190608)

Chromosome 5B - NC_041389.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119308541 Neighboring gene uncharacterized LOC119308543 Neighboring gene uncharacterized LOC119308546 Neighboring gene pentatricopeptide repeat-containing protein At3g09650, chloroplastic-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041389.1 Chromosome 5B Reference WEW_v2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity, hydrolyzing O-glycosyl compounds IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glucan endo-1,3-beta-glucosidase 4-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Triticum dicoccoides Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference WEW_v2.0

Genomic

  1. NC_041389.1 Reference WEW_v2.0

    Range
    297186363..297190608
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037584674.1 → XP_037440571.1  glucan endo-1,3-beta-glucosidase 4-like isoform X1

    Conserved Domains (2) summary
    smart00768
    Location:369 → 453
    X8; Possibly involved in carbohydrate binding
    cl23725
    Location:31 → 352
    Glyco_hydro; Glycosyl hydrolases

  2. XM_037584673.1 → XP_037440570.1  glucan endo-1,3-beta-glucosidase 4-like isoform X1

    Conserved Domains (2) summary
    smart00768
    Location:369 → 453
    X8; Possibly involved in carbohydrate binding
    cl23725
    Location:31 → 352
    Glyco_hydro; Glycosyl hydrolases

  3. XM_037584676.1 → XP_037440573.1  glucan endo-1,3-beta-glucosidase 4-like isoform X3

    Conserved Domains (2) summary
    smart00768
    Location:369 → 446
    X8; Possibly involved in carbohydrate binding
    cl23725
    Location:31 → 352
    Glyco_hydro; Glycosyl hydrolases

  4. XM_037584677.1 → XP_037440574.1  glucan endo-1,3-beta-glucosidase 4-like isoform X4

    Conserved Domains (2) summary
    smart00768
    Location:369 → 446
    X8; Possibly involved in carbohydrate binding
    cl23725
    Location:31 → 352
    Glyco_hydro; Glycosyl hydrolases

  5. XM_037584675.1 → XP_037440572.1  glucan endo-1,3-beta-glucosidase 4-like isoform X2

    Conserved Domains (2) summary
    smart00768
    Location:369 → 449
    X8; Possibly involved in carbohydrate binding
    cl23725
    Location:31 → 352
    Glyco_hydro; Glycosyl hydrolases
Nucleotide Protein
Heading Accession and Version

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