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smpB SsrA-binding protein [ Aquifex aeolicus VF5 ]

Gene ID: 1192874, discontinued on 6-Mar-2020
  • This record was discontinued.
Gene symbol
smpB
Gene description
SsrA-binding protein
Locus tag
aq_287
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Aquifex aeolicus VF5 (strain: VF5)
Lineage
Bacteria; Aquificae; Aquificales; Aquificaceae; Aquifex
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Genomic Sequence:
NC_000918.1

Go to nucleotide: Graphics FASTA GenBank

GeneRIFs: Gene References Into Functions

Names
SsrA-binding protein
NP_213200.1
  • binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000918.1 Reference assembly

    Range
    186900..187373 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_213200.1 SsrA-binding protein [Aquifex aeolicus VF5]

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O66640.1

Gene LinkOut

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Research Materials