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nirD nitrite reductase small subunit NirD [ Vibrio parahaemolyticus RIMD 2210633 ]

Gene ID: 1191749, updated on 4-Feb-2024

Summary

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Gene symbol
nirD
Gene description
nitrite reductase small subunit NirD
Locus tag
VP_RS20235
Gene type
protein coding
Organism
Vibrio parahaemolyticus RIMD 2210633 (strain: RIMD 2210633, substrain: RIMD 2210633)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio
Old locus tag
VPA1054
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Genomic context

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Location:
chromosome: 2
Sequence:
Chromosome: 2; NC_004605.1 (1111677..1112012, complement)

Chromosome 2 - NC_004605.1Genomic Context describing neighboring genes Neighboring gene TetR/AcrR family transcriptional regulator Neighboring gene DNA-binding protein Neighboring gene nitrite reductase large subunit NirB Neighboring gene ABC transporter ATP-binding protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_004605.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A filamentous phage associated with recent pandemic Vibrio parahaemolyticus O3:K6 strains. Nasu H, et al. J Clin Microbiol, 2000 Jun. PMID 10834969, Free PMC Article
  2. Genome sequence of Vibrio parahaemolyticus: a pathogenic mechanism distinct from that of V cholerae. Makino K, et al. Lancet, 2003 Mar 1. PMID 12620739

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
nitrite reductase small subunit NirD

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004605.1 Reference assembly

    Range
    1111677..1112012 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_005463771.1 nitrite reductase small subunit NirD [Vibrio parahaemolyticus]

    See identical proteins and their annotated locations for WP_005463771.1

    UniProtKB/TrEMBL
    Q87HB1
    Conserved Domains (1) summary
    cd03529
    Location:7 → 105
    Rieske_NirD; Assimilatory nitrite reductase (NirD) family, Rieske domain; Assimilatory nitrate and nitrite reductases convert nitrate through nitrite to ammonium. Members include bacterial and fungal proteins. The bacterial NirD contains a single Rieske domain while ...
Nucleotide Protein
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Gene LinkOut

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