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pyrF orotidine-5'-phosphate decarboxylase [ Vibrio parahaemolyticus RIMD 2210633 ]

Gene ID: 1189537, updated on 31-Jan-2024

Summary

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Gene symbol
pyrF
Gene description
orotidine-5'-phosphate decarboxylase
Locus tag
VP_RS09845
Gene type
protein coding
Organism
Vibrio parahaemolyticus RIMD 2210633 (strain: RIMD 2210633, substrain: RIMD 2210633)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio
Old locus tag
VP2026
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Genomic context

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Location:
chromosome: 1
Sequence:
Chromosome: 1; NC_004603.1 (2124152..2124853, complement)

Chromosome 1 - NC_004603.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene extracellular solute-binding protein Neighboring gene lipopolysaccharide assembly protein LapB Neighboring gene lipopolysaccharide assembly protein LapA domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_004603.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. An alternative explanation for the catalytic proficiency of orotidine 5'-phosphate decarboxylase. Lee TS, et al. J Am Chem Soc, 2001 Dec 26. PMID 11749542
  2. A filamentous phage associated with recent pandemic Vibrio parahaemolyticus O3:K6 strains. Nasu H, et al. J Clin Microbiol, 2000 Jun. PMID 10834969, Free PMC Article
  3. Genome sequence of Vibrio parahaemolyticus: a pathogenic mechanism distinct from that of V cholerae. Makino K, et al. Lancet, 2003 Mar 1. PMID 12620739

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
orotidine-5'-phosphate decarboxylase
WP_005481650.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004603.1 Reference assembly

    Range
    2124152..2124853 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_005481650.1 MULTISPECIES: orotidine-5'-phosphate decarboxylase [Vibrio]

    See identical proteins and their annotated locations for WP_005481650.1

    UniProtKB/Swiss-Prot
    Q87N49
    UniProtKB/TrEMBL
    A0A0L8T321
    Conserved Domains (1) summary
    PRK00230
    Location:2 → 232
    PRK00230; orotidine-5'-phosphate decarboxylase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q87N49.1

Gene LinkOut

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