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ZNF511 zinc finger protein 511 [ Homo sapiens (human) ]

Gene ID: 118472, updated on 23-Nov-2021

Summary

Official Symbol
ZNF511provided by HGNC
Official Full Name
zinc finger protein 511provided by HGNC
Primary source
HGNC:HGNC:28445
See related
Ensembl:ENSG00000198546
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
Zfp511
Expression
Ubiquitous expression in ovary (RPKM 11.4), prostate (RPKM 10.5) and 25 other tissues See more
Orthologs
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Genomic context

See ZNF511 in Genome Data Viewer
Location:
10q26.3
Exon count:
6
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 10 NC_000010.11 (133308914..133313161)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (135122418..135126665)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene MIR202 host gene Neighboring gene microRNA 202 Neighboring gene ADAM metallopeptidase domain 8 Neighboring gene tubulin gamma complex associated protein 2 Neighboring gene ZNF511-PRAP1 readthrough Neighboring gene Sharpr-MPRA regulatory region 2011 Neighboring gene calcyon neuron specific vesicular protein Neighboring gene BANF1 pseudogene 2

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Readthrough ZNF511-PRAP1

Readthrough gene: ZNF511-PRAP1, Included gene: PRAP1

Homology

Clone Names

  • MGC30006

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 
enables DNA-binding transcription factor activity, RNA polymerase II-specific ISA
Inferred from Sequence Alignment
more info
 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in chromatin ISA
Inferred from Sequence Alignment
more info
 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_145806.4NP_665805.2  zinc finger protein 511

    See identical proteins and their annotated locations for NP_665805.2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript and encodes the protein.
    Source sequence(s)
    BC019897, HY179580
    Consensus CDS
    CCDS7677.1
    UniProtKB/Swiss-Prot
    Q8NB15
    Related
    ENSP00000355251.5, ENST00000361518.10

RNA

  1. NR_130127.2 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) uses an alternate splice site at an internal exon compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
    Source sequence(s)
    AL530248, BC019897, HY159562, HY179580

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p13 Primary Assembly

    Range
    133308914..133313161
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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