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meltf melanotransferrin [ Scophthalmus maximus (turbot) ]

Gene ID: 118318319, updated on 20-Mar-2024

Summary

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Gene symbol
meltf
Gene description
melanotransferrin
See related
EnsemblRapid:ENSSMAG00025015427
Gene type
protein coding
RefSeq status
MODEL
Organism
Scophthalmus maximus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Scophthalmidae; Scophthalmus
Orthologs
human zebrafish all
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Genomic context

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See meltf in Genome Data Viewer
Location:
chromosome: 13
Exon count:
16
Annotation release Status Assembly Chr Location
101 current ASM2237912v1 (GCF_022379125.1) 13 NC_061527.1 (4724470..4734587, complement)
100 previous assembly ASM1334776v1 (GCF_013347765.1) 12 NC_049699.1 (4788821..4798946, complement)

Chromosome 13 - NC_061527.1Genomic Context describing neighboring genes Neighboring gene NCBP2 antisense 2 (head to head) Neighboring gene discs large homolog 1-like protein Neighboring gene FKBP prolyl isomerase 2 Neighboring gene leucine rich repeat containing 7

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. High-throughput sequence analysis of turbot (Scophthalmus maximus) transcriptome using 454-pyrosequencing for the discovery of antiviral immune genes. Pereiro P, et al. PLoS One, 2012. PMID 22629298, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in iron ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in early endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in recycling endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
melanotransferrin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Scophthalmus maximus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2237912v1 Primary Assembly

Genomic

  1. NC_061527.1 Reference ASM2237912v1 Primary Assembly

    Range
    4724470..4734587 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035647850.2 → XP_035503743.1  melanotransferrin

    UniProtKB/TrEMBL
    A0A2U9C4H7, A0A8D3BK03
    Related
    ENSSMAP00025050625.1, ENSSMAT00025053172.1
    Conserved Domains (1) summary
    smart00094
    Location:359 → 688
    TR_FER; Transferrin
Nucleotide Protein Strain
Heading Accession and Version

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