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DNAJC5 DnaJ heat shock protein family (Hsp40) member C5 [ Trachemys scripta elegans ]

Gene ID: 117885641, updated on 19-Mar-2024

Summary

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Gene symbol
DNAJC5
Gene description
DnaJ heat shock protein family (Hsp40) member C5
Gene type
protein coding
RefSeq status
MODEL
Organism
Trachemys scripta elegans (sub-species: elegans)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Trachemys
Orthologs
human mouse all
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Genomic context

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See DNAJC5 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
6
Annotation release Status Assembly Chr Location
100 current CAS_Tse_1.0 (GCF_013100865.1) 12 NC_048309.1 (4223165..4267354)

Chromosome 12 - NC_048309.1Genomic Context describing neighboring genes Neighboring gene TPD52 like 2 Neighboring gene transfer RNA glutamic acid (anticodon CUC) Neighboring gene tripartite motif-containing protein 54-like Neighboring gene uridine-cytidine kinase 1 like 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_048309.1 Chromosome 12 Reference CAS_Tse_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Embryonic Transcriptome of the Red-Eared Slider Turtle (Trachemys scripta). Kaplinsky NJ, et al. PLoS One, 2013. PMID 23840449, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in chaperone-mediated protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of synaptic vesicle cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in presynapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dnaJ homolog subfamily C member 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Trachemys scripta elegans Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAS_Tse_1.0 Primary Assembly

Genomic

  1. NC_048309.1 Reference CAS_Tse_1.0 Primary Assembly

    Range
    4223165..4267354
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034786968.1 → XP_034642859.1  dnaJ homolog subfamily C member 5

    Conserved Domains (2) summary
    COG0484
    Location:15 → 84
    DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
    COG4074
    Location:138 → 173
    Mth; 5,10-methenyltetrahydromethanopterin hydrogenase [Energy production and conversion]
Nucleotide Protein
Heading Accession and Version

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