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sfl N-deacetylase and N-sulfotransferase sfl [ Drosophila guanche ]

Gene ID: 117587508, updated on 22-May-2024

Summary

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Gene symbol
sfl
Gene description
N-deacetylase and N-sulfotransferase sfl
Locus tag
DGUA_6G015058
See related
EnsemblRapid:LOC117587508
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila guanche
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Orthologs
fruit fly all
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Genomic context

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See sfl in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current DGUA_6 (GCF_900245975.1) Unplaced Scaffold NW_022995751.1 (3486758..3544658)

NW_022995751.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 93-like Neighboring gene zinc finger protein 93-like Neighboring gene vacuolar protein sorting 8 Neighboring gene regulator of MON1-CCZ1 complex protein bulli Neighboring gene protein javelin Neighboring gene mitochondrial calcium uniporter Neighboring gene purine nucleoside phosphorylase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022995751 Unplaced Scaffold Reference DGUA_6

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine N-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables deacetylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
bifunctional heparan sulfate N-deacetylase/N-sulfotransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila guanche Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DGUA_6

Genomic

  1. NW_022995751.1 Reference DGUA_6

    Range
    3486758..3544658
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034278299.1 → XP_034134190.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase

    UniProtKB/TrEMBL
    A0A3B0KHE6
    Related
    XP_034134190.1, XM_034278299.1
    Conserved Domains (2) summary
    pfam00685
    Location:756 → 1018
    Sulfotransfer_1; Sulfotransferase domain
    pfam12062
    Location:177 → 667
    HSNSD; heparan sulfate-N-deacetylase
Nucleotide Protein
Heading Accession and Version

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