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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001350727.2 → NP_001337656.1 WD repeat-containing protein 17 isoform 3
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR, uses a downstream start codon and contains multiple coding region differences, compared to variant 1. It encodes isoform 3, which is shorter, compared to isoform 1.
- Source sequence(s)
-
AC093605, AF492460, BC146812, BM875452, BX648508
- Conserved Domains (3) summary
-
- COG2319
Location:20 → 444
- WD40; WD40 repeat [General function prediction only]
- cd00200
Location:391 → 681
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- sd00039
Location:357 → 391
- 7WD40; WD40 repeat [structural motif]
-
NM_001378103.1 → NP_001365032.1 WD repeat-containing protein 17 isoform 4
Status: REVIEWED
- Source sequence(s)
-
AC093605
- Conserved Domains (3) summary
-
- COG2319
Location:44 → 444
- WD40; WD40 repeat [General function prediction only]
- cd00200
Location:391 → 681
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- sd00039
Location:357 → 391
- 7WD40; WD40 repeat [structural motif]
-
NM_001378104.1 → NP_001365033.1 WD repeat-containing protein 17 isoform 5
Status: REVIEWED
- Source sequence(s)
-
AC093605
- Conserved Domains (3) summary
-
- COG2319
Location:20 → 420
- WD40; WD40 repeat [General function prediction only]
- cd00200
Location:367 → 657
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- sd00039
Location:333 → 367
- 7WD40; WD40 repeat [structural motif]
-
NM_001378105.1 → NP_001365034.1 WD repeat-containing protein 17 isoform 6
Status: REVIEWED
- Source sequence(s)
-
AC093605
-
NM_001378106.1 → NP_001365035.1 WD repeat-containing protein 17 isoform 7
Status: REVIEWED
- Source sequence(s)
-
AC093605
-
NM_170710.5 → NP_733828.2 WD repeat-containing protein 17 isoform 1
See identical proteins and their annotated locations for NP_733828.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1).
- Source sequence(s)
-
AC093605, AF492460, DB443937
- Consensus CDS
-
CCDS3825.1
- UniProtKB/Swiss-Prot
-
Q8IZU2
- Related
- ENSP00000280190.4, ENST00000280190.8
- Conserved Domains (4) summary
-
- COG2319
Location:169 → 640
- WD40; WD40 repeat [General function prediction only]
- cd00200
Location:391 → 681
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- sd00039
Location:357 → 391
- 7WD40; WD40 repeat [structural motif]
- cl02567
Location:74 → 298
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
NM_181265.4 → NP_851782.3 WD repeat-containing protein 17 isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks a portion of the 5' coding region, uses a downstream start codon, and lacks an in-frame segment of the 3' coding region, compared to variant 1. The encoded isoform (2) has a shorter N-terminus, compared to isoform 1.
- Source sequence(s)
-
AC093605, BC146812
- Consensus CDS
-
CCDS43284.2
- UniProtKB/Swiss-Prot
-
Q8IZU2
- Related
- ENSP00000422763.1, ENST00000508596.5
- Conserved Domains (4) summary
-
- COG2319
Location:145 → 616
- WD40; WD40 repeat [General function prediction only]
- cd00200
Location:367 → 657
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- sd00039
Location:333 → 367
- 7WD40; WD40 repeat [structural motif]
- cl02567
Location:14 → 274
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p13 Primary Assembly
Genomic
-
NC_000004.12 Reference GRCh38.p13 Primary Assembly
- Range
-
176065841..176182824
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_017007692.2 → XP_016863181.1 WD repeat-containing protein 17 isoform X7
-
XM_017007690.2 → XP_016863179.1 WD repeat-containing protein 17 isoform X4
-
XM_024453886.1 → XP_024309654.1 WD repeat-containing protein 17 isoform X11
- Conserved Domains (3) summary
-
- cd00200
Location:293 → 583
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- sd00039
Location:259 → 293
- 7WD40; WD40 repeat [structural motif]
- cl25539
Location:53 → 324
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
XM_017007694.1 → XP_016863183.1 WD repeat-containing protein 17 isoform X8
-
XM_017007697.1 → XP_016863186.1 WD repeat-containing protein 17 isoform X12
-
XM_024453885.1 → XP_024309653.1 WD repeat-containing protein 17 isoform X1
- Conserved Domains (3) summary
-
- COG2319
Location:44 → 468
- WD40; WD40 repeat [General function prediction only]
- cd00200
Location:415 → 705
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- sd00039
Location:381 → 415
- 7WD40; WD40 repeat [structural motif]
-
XM_017007686.2 → XP_016863175.1 WD repeat-containing protein 17 isoform X2
- Related
- ENSP00000422200.2, ENST00000507824.6
- Conserved Domains (3) summary
-
- COG2319
Location:44 → 444
- WD40; WD40 repeat [General function prediction only]
- cd00200
Location:391 → 681
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- sd00039
Location:357 → 391
- 7WD40; WD40 repeat [structural motif]
-
XM_017007689.1 → XP_016863178.1 WD repeat-containing protein 17 isoform X3
- Conserved Domains (4) summary
-
- COG2319
Location:169 → 640
- WD40; WD40 repeat [General function prediction only]
- cd00200
Location:391 → 681
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- sd00039
Location:357 → 391
- 7WD40; WD40 repeat [structural motif]
- cl02567
Location:38 → 298
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
XM_017007693.1 → XP_016863182.1 WD repeat-containing protein 17 isoform X8
-
XM_017007691.1 → XP_016863180.1 WD repeat-containing protein 17 isoform X6
RNA
-
XR_001741103.1 RNA Sequence