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Aip aryl-hydrocarbon receptor-interacting protein [ Mus musculus (house mouse) ]

Gene ID: 11632, updated on 8-May-2024

Summary

Official Symbol
Aipprovided by MGI
Official Full Name
aryl-hydrocarbon receptor-interacting proteinprovided by MGI
Primary source
MGI:MGI:109622
See related
Ensembl:ENSMUSG00000024847 AllianceGenome:MGI:109622
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Ara9; Xap2; Fkbp16; D19Bwg1412e
Summary
This gene encodes an Hsp90-associated protein that is localized to the cytoplasm. The encoded protein interacts with the aryl hydrocarbon receptor (AhR) and the tyrosine kinase receptor RET, inhibits AhR ubiquitination, and regulates the intracellular localization of AhR. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jan 2013]
Expression
Ubiquitous expression in ovary adult (RPKM 29.8), cerebellum adult (RPKM 28.9) and 28 other tissues See more
Orthologs
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Genomic context

See Aip in Genome Data Viewer
Location:
19 A; 19 3.82 cM
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 19 NC_000085.7 (4163756..4177233, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 19 NC_000085.6 (4113756..4126559, complement)

Chromosome 19 - NC_000085.7Genomic Context describing neighboring genes Neighboring gene calcium binding protein 2 Neighboring gene STARR-positive B cell enhancer ABC_E84 Neighboring gene cyclin dependent kinase 2 associated protein 2 Neighboring gene CapStarr-seq enhancer MGSCv37_chr19:4103876-4104077 Neighboring gene phosphatidylinositol transfer protein, membrane-associated 1 Neighboring gene STARR-positive B cell enhancer ABC_E1965 Neighboring gene STARR-positive B cell enhancer ABC_E1966 Neighboring gene transmembrane protein 134 Neighboring gene STARR-positive B cell enhancer ABC_E5674 Neighboring gene calcium binding protein 4 Neighboring gene STARR-positive B cell enhancer ABC_E11665 Neighboring gene G protein-coupled receptor 152

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables GAF domain binding ISO
Inferred from Sequence Orthology
more info
 
enables aryl hydrocarbon receptor binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables peptidyl-prolyl cis-trans isomerase activity IEA
Inferred from Electronic Annotation
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables transcription coregulator activity IPI
Inferred from Physical Interaction
more info
PubMed 
enables unfolded protein binding ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
involved_in protein maturation by protein folding ISO
Inferred from Sequence Orthology
more info
 
involved_in protein targeting to mitochondrion ISO
Inferred from Sequence Orthology
more info
 
involved_in regulation of protein kinase A signaling ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within xenobiotic metabolic process IPI
Inferred from Physical Interaction
more info
PubMed 
Component Evidence Code Pubs
part_of aryl hydrocarbon receptor complex IDA
Inferred from Direct Assay
more info
PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in cytosol IDA
Inferred from Direct Assay
more info
PubMed 
located_in cytosol ISO
Inferred from Sequence Orthology
more info
 
located_in membrane IDA
Inferred from Direct Assay
more info
PubMed 
colocalizes_with plasma membrane ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
AH receptor-interacting protein
NP_001263213.1
NP_001396682.1
NP_001396683.1
NP_057875.1
XP_036017297.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001276284.2NP_001263213.1  AH receptor-interacting protein

    See identical proteins and their annotated locations for NP_001263213.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) lacks a portion of the 5' UTR, compared to variant 1. Both variants 1 and 2 encode the same protein.
    Source sequence(s)
    AC109138
    Consensus CDS
    CCDS29415.1
    UniProtKB/Swiss-Prot
    O08915, Q3UJM2
    Related
    ENSMUSP00000025767.8, ENSMUST00000025767.14
    Conserved Domains (2) summary
    sd00006
    Location:181225
    TPR; TPR repeat [structural motif]
    cl19519
    Location:2990
    FKBP_C; FKBP-type peptidyl-prolyl cis-trans isomerase
  2. NM_001409753.1NP_001396682.1  AH receptor-interacting protein

    Status: VALIDATED

    Source sequence(s)
    AC109138, FO082289
    UniProtKB/Swiss-Prot
    O08915, Q3UJM2
  3. NM_001409754.1NP_001396683.1  AH receptor-interacting protein

    Status: VALIDATED

    Source sequence(s)
    AC109138
    UniProtKB/Swiss-Prot
    O08915, Q3UJM2
  4. NM_016666.4NP_057875.1  AH receptor-interacting protein

    See identical proteins and their annotated locations for NP_057875.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript. Both variants 1 and 2 encode the same protein.
    Source sequence(s)
    AC109138, FO082289
    Consensus CDS
    CCDS29415.1
    UniProtKB/Swiss-Prot
    O08915, Q3UJM2
    Related
    ENSMUSP00000113807.2, ENSMUST00000117831.8
    Conserved Domains (2) summary
    sd00006
    Location:181225
    TPR; TPR repeat [structural motif]
    cl19519
    Location:2990
    FKBP_C; FKBP-type peptidyl-prolyl cis-trans isomerase

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000085.7 Reference GRCm39 C57BL/6J

    Range
    4163756..4177233 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036161404.1XP_036017297.1  AH receptor-interacting protein isoform X1

    UniProtKB/Swiss-Prot
    O08915, Q3UJM2
    Conserved Domains (2) summary
    sd00006
    Location:181225
    TPR; TPR repeat [structural motif]
    cl19519
    Location:2990
    FKBP_C; FKBP-type peptidyl-prolyl cis-trans isomerase