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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001369026.1 → NP_001355955.1 agrin isoform 2
Status: VALIDATED
- Source sequence(s)
-
AL928667, CT998563
- Consensus CDS
-
CCDS89874.1
- UniProtKB/Swiss-Prot
-
B2RWU1
- Related
- ENSMUSP00000101200.3, ENSMUST00000105575.9
- Conserved Domains (7) summary
-
- smart00280
Location:384 → 429
- KAZAL; Kazal type serine protease inhibitors
- smart00200
Location:1014 → 1138
- SEA; Domain found in sea urchin sperm protein, enterokinase, agrin
- cd00054
Location:1707 → 1739
- EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
- cd00104
Location:316 → 356
- KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...
- pfam00050
Location:244 → 284
- Kazal_1; Kazal-type serine protease inhibitor domain
- pfam00053
Location:688 → 735
- Laminin_EGF; Laminin EGF domain
- pfam00054
Location:1282 → 1413
- Laminin_G_1; Laminin G domain
-
NM_001369027.1 → NP_001355956.1 agrin isoform 3 precursor
Status: VALIDATED
- Source sequence(s)
-
CT998563
- Conserved Domains (1) summary
-
- pfam03146
Location:46 → 148
- NtA; Agrin NtA domain
-
NM_021604.3 → NP_067617.3 agrin isoform 1 precursor
Status: VALIDATED
- Source sequence(s)
-
AL928667, CT998563
- Consensus CDS
-
CCDS19060.2
- UniProtKB/TrEMBL
-
M0QWP1
- Related
- ENSMUSP00000137931.2, ENSMUST00000180572.2
- Conserved Domains (8) summary
-
- smart00280
Location:491 → 536
- KAZAL; Kazal type serine protease inhibitors
- smart00200
Location:1121 → 1245
- SEA; Domain found in sea urchin sperm protein, enterokinase, agrin
- cd00054
Location:1810 → 1842
- EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
- cd00104
Location:423 → 463
- KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...
- pfam00050
Location:351 → 391
- Kazal_1; Kazal-type serine protease inhibitor domain
- pfam00053
Location:795 → 837
- Laminin_EGF; Laminin EGF domain
- pfam00054
Location:1389 → 1520
- Laminin_G_1; Laminin G domain
- pfam03146
Location:46 → 148
- NtA; Agrin NtA domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000070.7 Reference GRCm39 C57BL/6J
- Range
-
156249747..156281997 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_036163604.1 → XP_036019497.1 agrin isoform X5
- Conserved Domains (9) summary
-
- smart00280
Location:491 → 536
- KAZAL; Kazal type serine protease inhibitors
- smart00200
Location:1121 → 1245
- SEA; Domain found in sea urchin sperm protein, enterokinase, agrin
- cd00054
Location:1810 → 1842
- EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
- cd00104
Location:423 → 463
- KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...
- pfam00008
Location:1322 → 1352
- EGF; EGF-like domain
- pfam00053
Location:795 → 837
- Laminin_EGF; Laminin EGF domain
- pfam00054
Location:1389 → 1520
- Laminin_G_1; Laminin G domain
- pfam03146
Location:46 → 148
- NtA; Agrin NtA domain
- cl00097
Location:351 → 391
- KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...
-
XM_011250176.3 → XP_011248478.1 agrin isoform X2
- Conserved Domains (10) summary
-
- smart00280
Location:491 → 536
- KAZAL; Kazal type serine protease inhibitors
- smart00200
Location:1121 → 1245
- SEA; Domain found in sea urchin sperm protein, enterokinase, agrin
- cd00054
Location:1810 → 1842
- EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
- cd00055
Location:795 → 835
- EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
- cd00104
Location:423 → 463
- KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...
- pfam00008
Location:1322 → 1352
- EGF; EGF-like domain
- pfam00050
Location:351 → 391
- Kazal_1; Kazal-type serine protease inhibitor domain
- pfam00054
Location:1389 → 1520
- Laminin_G_1; Laminin G domain
- pfam00053
Location:849 → 885
- Laminin_EGF; Laminin EGF domain
- pfam03146
Location:46 → 148
- NtA; Agrin NtA domain
-
XM_006538494.5 → XP_006538557.1 agrin isoform X6
- Conserved Domains (9) summary
-
- smart00280
Location:491 → 536
- KAZAL; Kazal type serine protease inhibitors
- smart00200
Location:1121 → 1245
- SEA; Domain found in sea urchin sperm protein, enterokinase, agrin
- cd00054
Location:1814 → 1846
- EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
- cd00055
Location:795 → 835
- EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
- cd00104
Location:423 → 463
- KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...
- pfam00050
Location:351 → 391
- Kazal_1; Kazal-type serine protease inhibitor domain
- pfam00054
Location:1389 → 1520
- Laminin_G_1; Laminin G domain
- pfam00053
Location:849 → 885
- Laminin_EGF; Laminin EGF domain
- pfam03146
Location:46 → 148
- NtA; Agrin NtA domain
-
XM_006538492.3 → XP_006538555.1 agrin isoform X3
- Conserved Domains (10) summary
-
- smart00280
Location:491 → 536
- KAZAL; Kazal type serine protease inhibitors
- smart00200
Location:1121 → 1245
- SEA; Domain found in sea urchin sperm protein, enterokinase, agrin
- cd00054
Location:1814 → 1846
- EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
- cd00055
Location:795 → 835
- EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
- cd00104
Location:423 → 463
- KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...
- pfam00008
Location:1322 → 1352
- EGF; EGF-like domain
- pfam00050
Location:351 → 391
- Kazal_1; Kazal-type serine protease inhibitor domain
- pfam00054
Location:1389 → 1520
- Laminin_G_1; Laminin G domain
- pfam00053
Location:849 → 885
- Laminin_EGF; Laminin EGF domain
- pfam03146
Location:46 → 148
- NtA; Agrin NtA domain
-
XM_006538493.3 → XP_006538556.1 agrin isoform X4
- Conserved Domains (10) summary
-
- smart00280
Location:491 → 536
- KAZAL; Kazal type serine protease inhibitors
- smart00200
Location:1121 → 1245
- SEA; Domain found in sea urchin sperm protein, enterokinase, agrin
- cd00054
Location:1814 → 1846
- EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
- cd00055
Location:795 → 835
- EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
- cd00104
Location:423 → 463
- KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...
- pfam00008
Location:1322 → 1352
- EGF; EGF-like domain
- pfam00050
Location:351 → 391
- Kazal_1; Kazal-type serine protease inhibitor domain
- pfam00054
Location:1389 → 1520
- Laminin_G_1; Laminin G domain
- pfam00053
Location:849 → 885
- Laminin_EGF; Laminin EGF domain
- pfam03146
Location:46 → 148
- NtA; Agrin NtA domain
-
XM_006538491.3 → XP_006538554.1 agrin isoform X1
- Conserved Domains (10) summary
-
- smart00280
Location:491 → 536
- KAZAL; Kazal type serine protease inhibitors
- smart00200
Location:1121 → 1245
- SEA; Domain found in sea urchin sperm protein, enterokinase, agrin
- cd00054
Location:1814 → 1846
- EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
- cd00055
Location:795 → 835
- EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
- cd00104
Location:423 → 463
- KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...
- pfam00008
Location:1322 → 1352
- EGF; EGF-like domain
- pfam00050
Location:351 → 391
- Kazal_1; Kazal-type serine protease inhibitor domain
- pfam00054
Location:1389 → 1520
- Laminin_G_1; Laminin G domain
- pfam00053
Location:849 → 885
- Laminin_EGF; Laminin EGF domain
- pfam03146
Location:46 → 148
- NtA; Agrin NtA domain
-
XM_006538496.4 → XP_006538559.1 agrin isoform X8
- Conserved Domains (8) summary
-
- smart00280
Location:323 → 368
- KAZAL; Kazal type serine protease inhibitors
- smart00200
Location:953 → 1077
- SEA; Domain found in sea urchin sperm protein, enterokinase, agrin
- cd00054
Location:1646 → 1678
- EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
- cd00055
Location:627 → 667
- EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
- cd00104
Location:255 → 295
- KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...
- pfam00050
Location:183 → 223
- Kazal_1; Kazal-type serine protease inhibitor domain
- pfam00054
Location:1221 → 1352
- Laminin_G_1; Laminin G domain
- pfam00053
Location:681 → 717
- Laminin_EGF; Laminin EGF domain
-
XM_006538495.4 → XP_006538558.1 agrin isoform X7
- Conserved Domains (8) summary
-
- smart00280
Location:384 → 429
- KAZAL; Kazal type serine protease inhibitors
- smart00200
Location:1014 → 1138
- SEA; Domain found in sea urchin sperm protein, enterokinase, agrin
- cd00054
Location:1707 → 1739
- EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
- cd00055
Location:688 → 728
- EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
- cd00104
Location:316 → 356
- KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...
- pfam00050
Location:244 → 284
- Kazal_1; Kazal-type serine protease inhibitor domain
- pfam00054
Location:1282 → 1413
- Laminin_G_1; Laminin G domain
- pfam00053
Location:742 → 778
- Laminin_EGF; Laminin EGF domain
-
XM_017319921.1 → XP_017175410.1 agrin isoform X9
- Conserved Domains (8) summary
-
- smart00280
Location:257 → 302
- KAZAL; Kazal type serine protease inhibitors
- smart00200
Location:887 → 1011
- SEA; Domain found in sea urchin sperm protein, enterokinase, agrin
- cd00054
Location:1580 → 1612
- EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
- cd00055
Location:561 → 601
- EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
- cd00104
Location:189 → 229
- KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...
- pfam00050
Location:117 → 157
- Kazal_1; Kazal-type serine protease inhibitor domain
- pfam00054
Location:1155 → 1286
- Laminin_G_1; Laminin G domain
- pfam00053
Location:615 → 651
- Laminin_EGF; Laminin EGF domain
-
XM_036163605.1 → XP_036019498.1 agrin isoform X11
- Conserved Domains (6) summary
-
- smart00280
Location:162 → 209
- KAZAL; Kazal type serine protease inhibitors
- smart00200
Location:359 → 483
- SEA; Domain found in sea urchin sperm protein, enterokinase, agrin
- cd00054
Location:1052 → 1084
- EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
- pfam00008
Location:560 → 590
- EGF; EGF-like domain
- pfam00053
Location:33 → 84
- Laminin_EGF; Laminin EGF domain
- pfam00054
Location:627 → 758
- Laminin_G_1; Laminin G domain
-
XM_030253098.1 → XP_030108958.1 agrin isoform X11
- Conserved Domains (6) summary
-
- smart00280
Location:162 → 209
- KAZAL; Kazal type serine protease inhibitors
- smart00200
Location:359 → 483
- SEA; Domain found in sea urchin sperm protein, enterokinase, agrin
- cd00054
Location:1052 → 1084
- EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
- pfam00008
Location:560 → 590
- EGF; EGF-like domain
- pfam00053
Location:33 → 84
- Laminin_EGF; Laminin EGF domain
- pfam00054
Location:627 → 758
- Laminin_G_1; Laminin G domain
-
XM_011250178.1 → XP_011248480.1 agrin isoform X10
- Conserved Domains (7) summary
-
- smart00280
Location:37 → 82
- KAZAL; Kazal type serine protease inhibitors
- smart00200
Location:602 → 726
- SEA; Domain found in sea urchin sperm protein, enterokinase, agrin
- cd00054
Location:1295 → 1327
- EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
- cd00055
Location:276 → 316
- EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
- pfam00008
Location:803 → 833
- EGF; EGF-like domain
- pfam00054
Location:870 → 1001
- Laminin_G_1; Laminin G domain
- pfam00053
Location:330 → 366
- Laminin_EGF; Laminin EGF domain
RNA
-
XR_881417.4 RNA Sequence
-
XR_390724.3 RNA Sequence