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LOC115723438 olivetolic acid cyclase-like [ Cannabis sativa ]

Gene ID: 115723438, updated on 3-Dec-2024

Summary

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Gene symbol
LOC115723438
Gene description
olivetolic acid cyclase-like
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Cannabis sativa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
Also known as
OAC; OAC1; LA11519.1.1.3
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Genomic context

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See LOC115723438 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_11 current ASM2916894v1 (GCF_029168945.1) 9 NC_083609.1 (3882790..3883465, complement)
100.20200513 previous assembly cs10 (GCF_900626175.2) 9 NC_044376.1 (4279296..4279947, complement)

Chromosome 9 - NC_083609.1Genomic Context describing neighboring genes Neighboring gene stress-response A/B barrel domain-containing protein HS1 Neighboring gene chorismate synthase, chloroplastic Neighboring gene galactinol synthase 1 Neighboring gene small nucleolar RNA snoR114

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of olivetolic acid cyclase from Cannabis sativa reveals a unique catalytic route to plant polyketides. Gagne SJ, et al. Proc Natl Acad Sci U S A, 2012 Jul 31. PMID 22802619, Free PMC Article
  2. The draft genome and transcriptome of Cannabis sativa. van Bakel H, et al. Genome Biol, 2011 Oct 20. PMID 22014239, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in pollen tube adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
olivetolic acid cyclase
Names
olivetolic acid cyclase f
NP_001384868.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001397939.1 → NP_001384868.1  olivetolic acid cyclase

    Status: VALIDATED

    Source sequence(s)
    JK493457, JN679224
    UniProtKB/Swiss-Prot
    I6WU39
    UniProtKB/TrEMBL
    A0A7C9EWP4, A0A7C9F3B5
    Conserved Domains (1) summary
    pfam07876
    Location:3 → 99
    Dabb; Stress responsive A/B Barrel Domain

RefSeqs of Annotated Genomes: GCF_029168945.1-RS_2023_11

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2916894v1 Primary Assembly

Genomic

  1. NC_083609.1 Reference ASM2916894v1 Primary Assembly

    Range
    3882790..3883465 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
I6WU39.1 GenPept UniProtKB/Swiss-Prot:I6WU39

Gene LinkOut

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Molecular Biology Databases