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sema7a semaphorin 7A (JohnMiltonHagen blood group) [ Sparus aurata (gilthead seabream) ]

Gene ID: 115586927, updated on 17-Mar-2024

Summary

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Gene symbol
sema7a
Gene description
semaphorin 7A (JohnMiltonHagen blood group)
See related
Ensembl:ENSSAUG00010007363
Gene type
protein coding
RefSeq status
MODEL
Organism
Sparus aurata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Spariformes; Sparidae; Sparus
Orthologs
zebrafish all
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Genomic context

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See sema7a in Genome Data Viewer
Location:
chromosome: 8
Exon count:
15
Annotation release Status Assembly Chr Location
100 current fSpaAur1.1 (GCF_900880675.1) 8 NC_044194.1 (12513094..12523744)

Chromosome 8 - NC_044194.1Genomic Context describing neighboring genes Neighboring gene mannosidase, alpha, class 2C, member 1 Neighboring gene nei-like DNA glycosylase 1 Neighboring gene COMM domain containing 4 Neighboring gene immunoglobulin superfamily containing leucine-rich repeat 2 Neighboring gene signaling receptor and transporter of retinol STRA6 Neighboring gene coiled-coil domain containing 33

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044194.1 Chromosome 8 Reference fSpaAur1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chemorepellent activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables integrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables semaphorin receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in integrin-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative chemotaxis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of axon extension involved in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neural crest cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of ERK1 and ERK2 cascade IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of axon extension IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of macrophage cytokine production IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of inflammatory response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in semaphorin-plexin signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
semaphorin-7A
Names
semaphorin 7A (John Milton Hagen blood group)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sparus aurata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSpaAur1.1 Primary Assembly

Genomic

  1. NC_044194.1 Reference fSpaAur1.1 Primary Assembly

    Range
    12513094..12523744
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030426400.1 → XP_030282260.1  semaphorin-7A isoform X1

    UniProtKB/TrEMBL
    A0A671UTM9
    Related
    ENSSAUP00010015920.1, ENSSAUT00010016875.1
    Conserved Domains (2) summary
    smart00423
    Location:472 → 513
    PSI; domain found in Plexins, Semaphorins and Integrins
    cl15693
    Location:55 → 470
    Sema; The Sema domain, a protein interacting module, of semaphorins and plexins

  2. XM_030426401.1 → XP_030282261.1  semaphorin-7A isoform X2

    Conserved Domains (2) summary
    smart00423
    Location:386 → 427
    PSI; domain found in Plexins, Semaphorins and Integrins
    cl15693
    Location:2 → 384
    Sema; The Sema domain, a protein interacting module, of semaphorins and plexins
Nucleotide Protein
Heading Accession and Version

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