U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC115586673 beta-1,4-N-acetylgalactosaminyltransferase 3-like [ Sparus aurata (gilthead seabream) ]

Gene ID: 115586673, updated on 21-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC115586673
Gene description
beta-1,4-N-acetylgalactosaminyltransferase 3-like
See related
Ensembl:ENSSAUG00010012088
Gene type
protein coding
RefSeq status
MODEL
Organism
Sparus aurata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Spariformes; Sparidae; Sparus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC115586673 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
22
Annotation release Status Assembly Chr Location
100 current fSpaAur1.1 (GCF_900880675.1) 8 NC_044194.1 (9873147..9905931, complement)

Chromosome 8 - NC_044194.1Genomic Context describing neighboring genes Neighboring gene beta-1,4-N-acetyl-galactosaminyl transferase 3b Neighboring gene troponin I, skeletal, slow c Neighboring gene FKBP prolyl isomerase 4 Neighboring gene DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_044194.1 Chromosome 8 Reference fSpaAur1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi cisterna membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
beta-1,4-N-acetylgalactosaminyltransferase 3-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Sparus aurata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSpaAur1.1 Primary Assembly

Genomic

  1. NC_044194.1 Reference fSpaAur1.1 Primary Assembly

    Range
    9873147..9905931 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030425915.1 → XP_030281775.1  beta-1,4-N-acetylgalactosaminyltransferase 3-like isoform X3

    UniProtKB/TrEMBL
    A0A671VMC3
    Related
    ENSSAUP00010028133.1, ENSSAUT00010029664.1
    Conserved Domains (2) summary
    cl08459
    Location:103 → 237
    PA14; PA14 domain
    cl11394
    Location:649 → 939
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  2. XM_030425916.1 → XP_030281776.1  beta-1,4-N-acetylgalactosaminyltransferase 3-like isoform X4

    UniProtKB/TrEMBL
    A0A671VUA2, A0A671VUB4
    Related
    ENSSAUP00010028136.1, ENSSAUT00010029667.1
    Conserved Domains (2) summary
    cl08459
    Location:103 → 237
    PA14; PA14 domain
    cl11394
    Location:623 → 913
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  3. XM_030425913.1 → XP_030281773.1  beta-1,4-N-acetylgalactosaminyltransferase 3-like isoform X1

    UniProtKB/TrEMBL
    A0A671VUA2
    Conserved Domains (2) summary
    cl08459
    Location:103 → 237
    PA14; PA14 domain
    cl11394
    Location:649 → 939
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  4. XM_030425914.1 → XP_030281774.1  beta-1,4-N-acetylgalactosaminyltransferase 3-like isoform X2

    UniProtKB/TrEMBL
    A0A671VR13
    Related
    ENSSAUP00010028142.1, ENSSAUT00010029673.1
    Conserved Domains (2) summary
    cl08459
    Location:103 → 237
    PA14; PA14 domain
    cl11394
    Location:649 → 939
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases