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TENT5B terminal nucleotidyltransferase 5B [ Homo sapiens (human) ]

Gene ID: 115572, updated on 11-Sep-2019

Summary

Official Symbol
TENT5Bprovided by HGNC
Official Full Name
terminal nucleotidyltransferase 5Bprovided by HGNC
Primary source
HGNC:HGNC:28273
See related
Ensembl:ENSG00000158246
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
FAM46B
Expression
Biased expression in esophagus (RPKM 30.7), skin (RPKM 15.3) and 11 other tissues See more
Orthologs

Genomic context

See TENT5B in Genome Data Viewer
Location:
1p36.11
Exon count:
2
Annotation release Status Assembly Chr Location
109.20190905 current GRCh38.p13 (GCF_000001405.39) 1 NC_000001.11 (27005020..27012850, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (27331511..27339333, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene Sharpr-MPRA regulatory region 6295 Neighboring gene Sharpr-MPRA regulatory region 4179 Neighboring gene TMF1 regulated nuclear protein 1 Neighboring gene uncharacterized LOC101928391 Neighboring gene solute carrier family 9 member A1 Neighboring gene Sharpr-MPRA regulatory region 8944

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • MGC16491, MGC20845

Gene Ontology Provided by GOA

Function Evidence Code Pubs
RNA adenylyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 

General protein information

Preferred Names
terminal nucleotidyltransferase 5B
Names
family with sequence similarity 46 member B
protein FAM46B
putative nucleotidyltransferase FAM46B

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_052943.4NP_443175.2  terminal nucleotidyltransferase 5B

    See identical proteins and their annotated locations for NP_443175.2

    Status: VALIDATED

    Source sequence(s)
    AL356390, BC014160, CN311438
    Consensus CDS
    CCDS294.2
    UniProtKB/Swiss-Prot
    Q96A09
    Related
    ENSP00000289166.5, ENST00000289166.6
    Conserved Domains (1) summary
    pfam07984
    Location:52365
    NTP_transf_7; Nucleotidyltransferase

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p13 Primary Assembly

    Range
    27005020..27012850 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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