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b4galnt3b beta-1,4-N-acetyl-galactosaminyl transferase 3b [ Gadus morhua (Atlantic cod) ]

Gene ID: 115551233, updated on 17-Mar-2024

Summary

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Gene symbol
b4galnt3b
Gene description
beta-1,4-N-acetyl-galactosaminyl transferase 3b
See related
Ensembl:ENSGMOG00000002666
Gene type
protein coding
RefSeq status
MODEL
Organism
Gadus morhua
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Zeiogadaria; Gadariae; Gadiformes; Gadoidei; Gadidae; Gadus
Orthologs
zebrafish all
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Genomic context

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See b4galnt3b in Genome Data Viewer
Location:
chromosome: 9
Exon count:
21
Annotation release Status Assembly Chr Location
100 current gadMor3.0 (GCF_902167405.1) 9 NC_044056.1 (1881903..1896699, complement)

Chromosome 9 - NC_044056.1Genomic Context describing neighboring genes Neighboring gene myo-inositol oxygenase Neighboring gene lipase maturation factor 2a Neighboring gene C2 calcium dependent domain containing 5 Neighboring gene FKBP prolyl isomerase 4 Neighboring gene DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11 Neighboring gene WAS protein family homolog 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044056.1 Chromosome 9 Reference gadMor3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi cisterna membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-N-acetylgalactosaminyltransferase 3-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gadus morhua Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference gadMor3.0 Primary Assembly

Genomic

  1. NC_044056.1 Reference gadMor3.0 Primary Assembly

    Range
    1881903..1896699 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030366863.1 → XP_030222723.1  beta-1,4-N-acetylgalactosaminyltransferase 3-like

    UniProtKB/TrEMBL
    A0A8C4ZWR3, A0A8C5A6S4
    Related
    ENSGMOP00000027412.1, ENSGMOT00000041865.1
    Conserved Domains (3) summary
    PHA03247
    Location:520 → 722
    PHA03247; large tegument protein UL36; Provisional
    cl08459
    Location:129 → 253
    PA14; PA14 domain
    cl11394
    Location:832 → 1131
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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