U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

st8sia2 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [ Gadus morhua (Atlantic cod) ]

Gene ID: 115550785, updated on 17-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
st8sia2
Gene description
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2
See related
Ensembl:ENSGMOG00000013018
Gene type
protein coding
RefSeq status
MODEL
Organism
Gadus morhua
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Zeiogadaria; Gadariae; Gadiformes; Gadoidei; Gadidae; Gadus
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See st8sia2 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
5
Annotation release Status Assembly Chr Location
100 current gadMor3.0 (GCF_902167405.1) 9 NC_044056.1 (20531536..20539149, complement)

Chromosome 9 - NC_044056.1Genomic Context describing neighboring genes Neighboring gene chromodomain helicase DNA binding protein 2 Neighboring gene uncharacterized LOC115550787 Neighboring gene family with sequence similarity 174 member B Neighboring gene solute carrier organic anion transporter family member 3A1a Neighboring gene uncharacterized LOC115550944

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_044056.1 Chromosome 9 Reference gadMor3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in oligosaccharide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
alpha-2,8-sialyltransferase 8B

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Gadus morhua Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference gadMor3.0 Primary Assembly

Genomic

  1. NC_044056.1 Reference gadMor3.0 Primary Assembly

    Range
    20531536..20539149 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030366085.1 → XP_030221945.1  alpha-2,8-sialyltransferase 8B isoform X1

    UniProtKB/TrEMBL
    A0A8C4ZHE1
    Related
    ENSGMOP00000013921.2, ENSGMOT00000014285.2
    Conserved Domains (1) summary
    pfam00777
    Location:99 → 358
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  2. XM_030366086.1 → XP_030221946.1  alpha-2,8-sialyltransferase 8B isoform X2

    Conserved Domains (1) summary
    pfam00777
    Location:93 → 352
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.