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birc2 baculoviral IAP repeat containing 2 [ Gadus morhua (Atlantic cod) ]

Gene ID: 115547038, updated on 17-Mar-2024

Summary

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Gene symbol
birc2
Gene description
baculoviral IAP repeat containing 2
See related
Ensembl:ENSGMOG00000014934
Gene type
protein coding
RefSeq status
MODEL
Organism
Gadus morhua
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Zeiogadaria; Gadariae; Gadiformes; Gadoidei; Gadidae; Gadus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 7
Exon count:
15
Annotation release Status Assembly Chr Location
100 current gadMor3.0 (GCF_902167405.1) 7 NC_044054.1 (12122403..12145065, complement)

Chromosome 7 - NC_044054.1Genomic Context describing neighboring genes Neighboring gene DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 Neighboring gene small nucleolar RNA Z17 Neighboring gene ribosomal protein L23a Neighboring gene solute carrier family 6 member 7 Neighboring gene retinoblastoma 1 Neighboring gene lysophosphatidic acid receptor 6-like Neighboring gene lysophosphatidic acid receptor 6-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044054.1 Chromosome 7 Reference gadMor3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type endopeptidase inhibitor activity involved in apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
inhibitor of apoptosis protein-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gadus morhua Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference gadMor3.0 Primary Assembly

Genomic

  1. NC_044054.1 Reference gadMor3.0 Primary Assembly

    Range
    12122403..12145065 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030360963.1 → XP_030216823.1  inhibitor of apoptosis protein-like isoform X1

    UniProtKB/TrEMBL
    A0A8C4ZLK0
    Conserved Domains (6) summary
    PHA02682
    Location:83 → 169
    PHA02682; ORF080 virion core protein; Provisional
    cd00022
    Location:308 → 375
    BIR; Baculoviral inhibition of apoptosis protein repeat domain; Found in inhibitors of apoptosis proteins (IAPs) and other proteins. In higher eukaryotes, BIR domains inhibit apoptosis by acting as direct inhibitors of the caspase family of protease enzymes. ...
    cd14394
    Location:436 → 485
    UBA_BIRC2_3; UBA domain found in baculoviral IAP repeat-containing protein BIRC2, BIRC3 and similar proteins
    cd16713
    Location:610 → 663
    RING-HC_BIRC2_3_7; RING finger, HC subclass, found in apoptosis protein c-IAP1, c-IAP2, livin, and similar proteins
    pfam00653
    Location:194 → 258
    BIR; Inhibitor of Apoptosis domain
    cl14633
    Location:496 → 589
    DD; Death Domain Superfamily of protein-protein interaction domains

  2. XM_030360962.1 → XP_030216822.1  inhibitor of apoptosis protein-like isoform X1

    UniProtKB/TrEMBL
    A0A8C4ZLK0
    Conserved Domains (6) summary
    PHA02682
    Location:83 → 169
    PHA02682; ORF080 virion core protein; Provisional
    cd00022
    Location:308 → 375
    BIR; Baculoviral inhibition of apoptosis protein repeat domain; Found in inhibitors of apoptosis proteins (IAPs) and other proteins. In higher eukaryotes, BIR domains inhibit apoptosis by acting as direct inhibitors of the caspase family of protease enzymes. ...
    cd14394
    Location:436 → 485
    UBA_BIRC2_3; UBA domain found in baculoviral IAP repeat-containing protein BIRC2, BIRC3 and similar proteins
    cd16713
    Location:610 → 663
    RING-HC_BIRC2_3_7; RING finger, HC subclass, found in apoptosis protein c-IAP1, c-IAP2, livin, and similar proteins
    pfam00653
    Location:194 → 258
    BIR; Inhibitor of Apoptosis domain
    cl14633
    Location:496 → 589
    DD; Death Domain Superfamily of protein-protein interaction domains

  3. XM_030360961.1 → XP_030216821.1  inhibitor of apoptosis protein-like isoform X1

    UniProtKB/TrEMBL
    A0A8C4ZLK0
    Conserved Domains (6) summary
    PHA02682
    Location:83 → 169
    PHA02682; ORF080 virion core protein; Provisional
    cd00022
    Location:308 → 375
    BIR; Baculoviral inhibition of apoptosis protein repeat domain; Found in inhibitors of apoptosis proteins (IAPs) and other proteins. In higher eukaryotes, BIR domains inhibit apoptosis by acting as direct inhibitors of the caspase family of protease enzymes. ...
    cd14394
    Location:436 → 485
    UBA_BIRC2_3; UBA domain found in baculoviral IAP repeat-containing protein BIRC2, BIRC3 and similar proteins
    cd16713
    Location:610 → 663
    RING-HC_BIRC2_3_7; RING finger, HC subclass, found in apoptosis protein c-IAP1, c-IAP2, livin, and similar proteins
    pfam00653
    Location:194 → 258
    BIR; Inhibitor of Apoptosis domain
    cl14633
    Location:496 → 589
    DD; Death Domain Superfamily of protein-protein interaction domains

  4. XM_030360960.1 → XP_030216820.1  inhibitor of apoptosis protein-like isoform X1

    UniProtKB/TrEMBL
    A0A8C4ZLK0
    Conserved Domains (6) summary
    PHA02682
    Location:83 → 169
    PHA02682; ORF080 virion core protein; Provisional
    cd00022
    Location:308 → 375
    BIR; Baculoviral inhibition of apoptosis protein repeat domain; Found in inhibitors of apoptosis proteins (IAPs) and other proteins. In higher eukaryotes, BIR domains inhibit apoptosis by acting as direct inhibitors of the caspase family of protease enzymes. ...
    cd14394
    Location:436 → 485
    UBA_BIRC2_3; UBA domain found in baculoviral IAP repeat-containing protein BIRC2, BIRC3 and similar proteins
    cd16713
    Location:610 → 663
    RING-HC_BIRC2_3_7; RING finger, HC subclass, found in apoptosis protein c-IAP1, c-IAP2, livin, and similar proteins
    pfam00653
    Location:194 → 258
    BIR; Inhibitor of Apoptosis domain
    cl14633
    Location:496 → 589
    DD; Death Domain Superfamily of protein-protein interaction domains

  5. XM_030360958.1 → XP_030216818.1  inhibitor of apoptosis protein-like isoform X1

    UniProtKB/TrEMBL
    A0A8C4ZLK0
    Conserved Domains (6) summary
    PHA02682
    Location:83 → 169
    PHA02682; ORF080 virion core protein; Provisional
    cd00022
    Location:308 → 375
    BIR; Baculoviral inhibition of apoptosis protein repeat domain; Found in inhibitors of apoptosis proteins (IAPs) and other proteins. In higher eukaryotes, BIR domains inhibit apoptosis by acting as direct inhibitors of the caspase family of protease enzymes. ...
    cd14394
    Location:436 → 485
    UBA_BIRC2_3; UBA domain found in baculoviral IAP repeat-containing protein BIRC2, BIRC3 and similar proteins
    cd16713
    Location:610 → 663
    RING-HC_BIRC2_3_7; RING finger, HC subclass, found in apoptosis protein c-IAP1, c-IAP2, livin, and similar proteins
    pfam00653
    Location:194 → 258
    BIR; Inhibitor of Apoptosis domain
    cl14633
    Location:496 → 589
    DD; Death Domain Superfamily of protein-protein interaction domains

  6. XM_030360956.1 → XP_030216816.1  inhibitor of apoptosis protein-like isoform X1

    UniProtKB/TrEMBL
    A0A8C4ZLK0
    Related
    ENSGMOP00000016010.2, ENSGMOT00000016419.2
    Conserved Domains (6) summary
    PHA02682
    Location:83 → 169
    PHA02682; ORF080 virion core protein; Provisional
    cd00022
    Location:308 → 375
    BIR; Baculoviral inhibition of apoptosis protein repeat domain; Found in inhibitors of apoptosis proteins (IAPs) and other proteins. In higher eukaryotes, BIR domains inhibit apoptosis by acting as direct inhibitors of the caspase family of protease enzymes. ...
    cd14394
    Location:436 → 485
    UBA_BIRC2_3; UBA domain found in baculoviral IAP repeat-containing protein BIRC2, BIRC3 and similar proteins
    cd16713
    Location:610 → 663
    RING-HC_BIRC2_3_7; RING finger, HC subclass, found in apoptosis protein c-IAP1, c-IAP2, livin, and similar proteins
    pfam00653
    Location:194 → 258
    BIR; Inhibitor of Apoptosis domain
    cl14633
    Location:496 → 589
    DD; Death Domain Superfamily of protein-protein interaction domains

  7. XM_030360964.1 → XP_030216824.1  inhibitor of apoptosis protein-like isoform X2

    UniProtKB/TrEMBL
    A0A8C4ZLK0, A0A8C5D0Y4
    Related
    ENSGMOP00000067698.1, ENSGMOT00000075633.1
    Conserved Domains (6) summary
    PHA02682
    Location:83 → 169
    PHA02682; ORF080 virion core protein; Provisional
    cd00022
    Location:308 → 375
    BIR; Baculoviral inhibition of apoptosis protein repeat domain; Found in inhibitors of apoptosis proteins (IAPs) and other proteins. In higher eukaryotes, BIR domains inhibit apoptosis by acting as direct inhibitors of the caspase family of protease enzymes. ...
    cd14394
    Location:429 → 478
    UBA_BIRC2_3; UBA domain found in baculoviral IAP repeat-containing protein BIRC2, BIRC3 and similar proteins
    cd16713
    Location:603 → 656
    RING-HC_BIRC2_3_7; RING finger, HC subclass, found in apoptosis protein c-IAP1, c-IAP2, livin, and similar proteins
    pfam00653
    Location:194 → 258
    BIR; Inhibitor of Apoptosis domain
    cl14633
    Location:489 → 582
    DD; Death Domain Superfamily of protein-protein interaction domains

  8. XM_030360965.1 → XP_030216825.1  inhibitor of apoptosis protein-like isoform X3

    UniProtKB/TrEMBL
    A0A8C4ZLK0
    Conserved Domains (6) summary
    PHA02682
    Location:83 → 169
    PHA02682; ORF080 virion core protein; Provisional
    cd00022
    Location:308 → 375
    BIR; Baculoviral inhibition of apoptosis protein repeat domain; Found in inhibitors of apoptosis proteins (IAPs) and other proteins. In higher eukaryotes, BIR domains inhibit apoptosis by acting as direct inhibitors of the caspase family of protease enzymes. ...
    cd14394
    Location:436 → 485
    UBA_BIRC2_3; UBA domain found in baculoviral IAP repeat-containing protein BIRC2, BIRC3 and similar proteins
    cd16713
    Location:596 → 649
    RING-HC_BIRC2_3_7; RING finger, HC subclass, found in apoptosis protein c-IAP1, c-IAP2, livin, and similar proteins
    pfam00653
    Location:194 → 258
    BIR; Inhibitor of Apoptosis domain
    cl14633
    Location:496 → 585
    DD; Death Domain Superfamily of protein-protein interaction domains

  9. XM_030360955.1 → XP_030216815.1  inhibitor of apoptosis protein-like isoform X1

    UniProtKB/TrEMBL
    A0A8C4ZLK0
    Conserved Domains (6) summary
    PHA02682
    Location:83 → 169
    PHA02682; ORF080 virion core protein; Provisional
    cd00022
    Location:308 → 375
    BIR; Baculoviral inhibition of apoptosis protein repeat domain; Found in inhibitors of apoptosis proteins (IAPs) and other proteins. In higher eukaryotes, BIR domains inhibit apoptosis by acting as direct inhibitors of the caspase family of protease enzymes. ...
    cd14394
    Location:436 → 485
    UBA_BIRC2_3; UBA domain found in baculoviral IAP repeat-containing protein BIRC2, BIRC3 and similar proteins
    cd16713
    Location:610 → 663
    RING-HC_BIRC2_3_7; RING finger, HC subclass, found in apoptosis protein c-IAP1, c-IAP2, livin, and similar proteins
    pfam00653
    Location:194 → 258
    BIR; Inhibitor of Apoptosis domain
    cl14633
    Location:496 → 589
    DD; Death Domain Superfamily of protein-protein interaction domains

  10. XM_030360959.1 → XP_030216819.1  inhibitor of apoptosis protein-like isoform X1

    UniProtKB/TrEMBL
    A0A8C4ZLK0
    Conserved Domains (6) summary
    PHA02682
    Location:83 → 169
    PHA02682; ORF080 virion core protein; Provisional
    cd00022
    Location:308 → 375
    BIR; Baculoviral inhibition of apoptosis protein repeat domain; Found in inhibitors of apoptosis proteins (IAPs) and other proteins. In higher eukaryotes, BIR domains inhibit apoptosis by acting as direct inhibitors of the caspase family of protease enzymes. ...
    cd14394
    Location:436 → 485
    UBA_BIRC2_3; UBA domain found in baculoviral IAP repeat-containing protein BIRC2, BIRC3 and similar proteins
    cd16713
    Location:610 → 663
    RING-HC_BIRC2_3_7; RING finger, HC subclass, found in apoptosis protein c-IAP1, c-IAP2, livin, and similar proteins
    pfam00653
    Location:194 → 258
    BIR; Inhibitor of Apoptosis domain
    cl14633
    Location:496 → 589
    DD; Death Domain Superfamily of protein-protein interaction domains
Nucleotide Protein
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