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LOC115540092 acylphosphatase-2-like [ Gadus morhua (Atlantic cod) ]

Gene ID: 115540092, updated on 23-Oct-2023

Summary

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Gene symbol
LOC115540092
Gene description
acylphosphatase-2-like
See related
Ensembl:ENSGMOG00000022753
Gene type
protein coding
RefSeq status
MODEL
Organism
Gadus morhua
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Zeiogadaria; Gadariae; Gadiformes; Gadoidei; Gadidae; Gadus
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Genomic context

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See LOC115540092 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
4
Annotation release Status Assembly Chr Location
100 current gadMor3.0 (GCF_902167405.1) 3 NC_044050.1 (22119518..22124303, complement)

Chromosome 3 - NC_044050.1Genomic Context describing neighboring genes Neighboring gene EMAP like 6 Neighboring gene spectrin beta, non-erythrocytic 1 Neighboring gene uncharacterized LOC115540095 Neighboring gene equilibrative nucleoside transporter 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044050.1 Chromosome 3 Reference gadMor3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acylphosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acylphosphatase-2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gadus morhua Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference gadMor3.0 Primary Assembly

Genomic

  1. NC_044050.1 Reference gadMor3.0 Primary Assembly

    Range
    22119518..22124303 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030351088.1 → XP_030206948.1  acylphosphatase-2-like

    UniProtKB/TrEMBL
    A0A8C5D1M8
    Related
    ENSGMOP00000068825.1, ENSGMOT00000071813.1
    Conserved Domains (1) summary
    pfam00708
    Location:28 → 113
    Acylphosphatase
Nucleotide Protein
Heading Accession and Version

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