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Snord60 small nucleolar RNA, C/D box 60 [ Mus musculus (house mouse) ]

Gene ID: 115488833, updated on 24-Apr-2022

Summary

Official Symbol
Snord60provided by MGI
Official Full Name
small nucleolar RNA, C/D box 60provided by MGI
Primary source
MGI:MGI:5453296
See related
Ensembl:ENSMUSG00000064768 AllianceGenome:MGI:5453296
Gene type
snoRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm23519
Summary
Acts upstream of or within intracellular cholesterol transport. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

See Snord60 in Genome Data Viewer
Location:
17 A3.3; 17
Exon count:
1
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (24747450..24747527)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (24528476..24528553)

Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene BRICHOS domain containing 5 Neighboring gene MTOR associated protein, LST8 homolog (S. cerevisiae) Neighboring gene CASK interacting protein 1 Neighboring gene TNF receptor-associated factor 7 Neighboring gene RAB26, member RAS oncogene family, opposite strand Neighboring gene RAB26, member RAS oncogene family Neighboring gene predicted gene, 33508

Genomic regions, transcripts, and products

General gene information

Other Names

  • small nucleolar RNA SNORD60

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within intracellular cholesterol transport IMP
Inferred from Mutant Phenotype
more info
PubMed 

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000083.7 Reference GRCm39 C57BL/6J

    Range
    24747450..24747527
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_004939753.1 RNA Sequence

    Related
    ENSMUST00000082834.3