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TPHA0F03230 hypothetical protein [ Tetrapisispora phaffii CBS 4417 ]

Gene ID: 11535435, updated on 22-Oct-2023

Summary

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Gene symbol
TPHA0F03230
Gene description
hypothetical protein
Locus tag
TPHA_0F03230
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Tetrapisispora phaffii CBS 4417 (strain: type strain:CBS 4417)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Tetrapisispora
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Genomic context

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See TPHA0F03230 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
1
Sequence:
Chromosome: 6; NC_016525.1 (704126..706663)

Chromosome 6 - NC_016525.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_016525.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA clamp loader activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in DNA replication IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of DNA replication factor C complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein
XP_003686238.1
  • similar to Saccharomyces cerevisiae RFC1 (YOR217W); ancestral locus Anc_8.637

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_016525.1 Reference assembly

    Range
    704126..706663
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003686190.1 → XP_003686238.1  hypothetical protein TPHA_0F03230 [Tetrapisispora phaffii CBS 4417]

    See identical proteins and their annotated locations for XP_003686238.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    G8BUL8
    Conserved Domains (6) summary
    cd00009
    Location:338 → 453
    AAA; The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes ABC, ...
    smart00382
    Location:338 → 467
    AAA; ATPases associated with a variety of cellular activities
    COG0470
    Location:434 → 513
    HolB; DNA polymerase III, delta prime subunit [Replication, recombination and repair]
    COG5275
    Location:1 → 242
    COG5275; BRCT domain type II [General function prediction only]
    cd00027
    Location:148 → 218
    BRCT; Breast Cancer Suppressor Protein (BRCA1), carboxy-terminal domain. The BRCT domain is found within many DNA damage repair and cell cycle checkpoint proteins. The unique diversity of this domain superfamily allows BRCT modules to interact forming homo ...
    pfam08519
    Location:609 → 764
    RFC1; Replication factor RFC1 C terminal domain
Nucleotide Protein
Heading Accession and Version

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