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TPHA0I02920 hypothetical protein [ Tetrapisispora phaffii CBS 4417 ]

Gene ID: 11534647, updated on 22-Oct-2023

Summary

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Gene symbol
TPHA0I02920
Gene description
hypothetical protein
Locus tag
TPHA_0I02920
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Tetrapisispora phaffii CBS 4417 (strain: type strain:CBS 4417)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Tetrapisispora
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Genomic context

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See TPHA0I02920 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
1
Sequence:
Chromosome: 9; NC_016528.1 (639184..642786)

Chromosome 9 - NC_016528.1Genomic Context describing neighboring genes Neighboring gene mitochondrial 37S ribosomal protein RSM7 Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_016528.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolutionary erosion of yeast sex chromosomes by mating-type switching accidents. Gordon JL, et al. Proc Natl Acad Sci U S A, 2011 Dec 13. PMID 22123960, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endosomal transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein
XP_003687227.1
  • similar to Saccharomyces cerevisiae EDE1 (YBL047C); ancestral locus Anc_7.488

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_016528.1 Reference assembly

    Range
    639184..642786
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003687179.1 → XP_003687227.1  hypothetical protein TPHA_0I02920 [Tetrapisispora phaffii CBS 4417]

    See identical proteins and their annotated locations for XP_003687227.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    G8BY15
    Conserved Domains (4) summary
    smart00027
    Location:284 → 377
    EH; Eps15 homology domain
    cd00052
    Location:295 → 359
    EH; Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A ...
    pfam07926
    Location:634 → 760
    TPR_MLP1_2; TPR/MLP1/MLP2-like protein
    cl23720
    Location:688 → 788
    RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)
Nucleotide Protein
Heading Accession and Version

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