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TPHA0G00560 hypothetical protein [ Tetrapisispora phaffii CBS 4417 ]

Gene ID: 11533526, updated on 22-Oct-2023

Summary

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Gene symbol
TPHA0G00560
Gene description
hypothetical protein
Locus tag
TPHA_0G00560
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Tetrapisispora phaffii CBS 4417 (strain: type strain:CBS 4417)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Tetrapisispora
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Genomic context

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Location:
chromosome: 7
Exon count:
1
Sequence:
Chromosome: 7; NC_016526.1 (105403..106794, complement)

Chromosome 7 - NC_016526.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_016526.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolutionary erosion of yeast sex chromosomes by mating-type switching accidents. Gordon JL, et al. Proc Natl Acad Sci U S A, 2011 Dec 13. PMID 22123960, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein
XP_003686326.1
  • similar to Saccharomyces cerevisiae UBP8 (YMR223W); ancestral locus Anc_8.742

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_016526.1 Reference assembly

    Range
    105403..106794 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003686278.1 → XP_003686326.1  hypothetical protein TPHA_0G00560 [Tetrapisispora phaffii CBS 4417]

    See identical proteins and their annotated locations for XP_003686326.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    G8BVG4
    Conserved Domains (3) summary
    cl02553
    Location:138 → 457
    Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
    pfam00443
    Location:138 → 457
    UCH; Ubiquitin carboxyl-terminal hydrolase
    pfam02148
    Location:46 → 107
    zf-UBP; Zn-finger in ubiquitin-hydrolases and other protein
Nucleotide Protein
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