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TPHA0E01190 hypothetical protein [ Tetrapisispora phaffii CBS 4417 ]

Gene ID: 11531194, updated on 22-Oct-2023

Summary

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Gene symbol
TPHA0E01190
Gene description
hypothetical protein
Locus tag
TPHA_0E01190
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Tetrapisispora phaffii CBS 4417 (strain: type strain:CBS 4417)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Tetrapisispora
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Genomic context

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See TPHA0E01190 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
1
Sequence:
Chromosome: 5; NC_016524.1 (242467..243405, complement)

Chromosome 5 - NC_016524.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_016524.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolutionary erosion of yeast sex chromosomes by mating-type switching accidents. Gordon JL, et al. Proc Natl Acad Sci U S A, 2011 Dec 13. PMID 22123960, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in nucleotide-excision repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription by RNA polymerase I IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of transcription factor TFIIH core complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription factor TFIIH holo complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein
XP_003685648.2
  • similar to Saccharomyces cerevisiae TFB1 (YDR311W); ancestral locus Anc_5.336

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_016524.1 Reference assembly

    Range
    242467..243405 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003685600.2 → XP_003685648.2  hypothetical protein TPHA_0E01190, partial [Tetrapisispora phaffii CBS 4417]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    G8BTI6
    Conserved Domains (2) summary
    pfam03909
    Location:225 → 280
    BSD; BSD domain
    pfam08567
    Location:8 → 105
    PH_TFIIH; TFIIH p62 subunit, N-terminal domain
Nucleotide Protein
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