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LOC115208460 acylphosphatase-2-like [ Salmo trutta (river trout) ]

Gene ID: 115208460, updated on 21-Dec-2023

Summary

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Gene symbol
LOC115208460
Gene description
acylphosphatase-2-like
See related
Ensembl:ENSSTUG00000008359
Gene type
protein coding
RefSeq status
MODEL
Organism
Salmo trutta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
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Genomic context

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See LOC115208460 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
5
Annotation release Status Assembly Chr Location
100 current fSalTru1.1 (GCF_901001165.1) 14 NC_042970.1 (58540016..58549078)

Chromosome 14 - NC_042970.1Genomic Context describing neighboring genes Neighboring gene alanyl-tRNA synthetase 2, mitochondrial (putative) Neighboring gene cilia and flagella associated protein 58 Neighboring gene 3-hydroxybutyrate dehydrogenase, type 2 Neighboring gene uncharacterized LOC115208461 Neighboring gene chromosome 14 C2orf73 homolog

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_042970.1 Chromosome 14 Reference fSalTru1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acylphosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acylphosphatase-2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salmo trutta Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSalTru1.1 Primary Assembly

Genomic

  1. NC_042970.1 Reference fSalTru1.1 Primary Assembly

    Range
    58540016..58549078
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029776526.1 → XP_029632386.1  acylphosphatase-2-like isoform X1

    UniProtKB/TrEMBL
    A0A673X374
    Related
    ENSSTUP00000018655.1, ENSSTUT00000019624.1
    Conserved Domains (1) summary
    pfam00708
    Location:35 → 120
    Acylphosphatase

  2. XM_029776528.1 → XP_029632388.1  acylphosphatase-2-like isoform X2

    Conserved Domains (1) summary
    cl00551
    Location:1 → 71
    Acylphosphatase

  3. XM_029776529.1 → XP_029632389.1  acylphosphatase-2-like isoform X2

    Conserved Domains (1) summary
    cl00551
    Location:1 → 71
    Acylphosphatase

  4. XM_029776527.1 → XP_029632387.1  acylphosphatase-2-like isoform X2

    Conserved Domains (1) summary
    cl00551
    Location:1 → 71
    Acylphosphatase
Nucleotide Protein
Heading Accession and Version

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