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LOC115180224 hemojuvelin-like [ Salmo trutta (river trout) ]

Gene ID: 115180224, updated on 21-Dec-2023

Summary

Gene symbol
LOC115180224
Gene description
hemojuvelin-like
See related
Ensembl:ENSSTUG00000008375
Gene type
protein coding
RefSeq status
MODEL
Organism
Salmo trutta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
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Genomic context

See LOC115180224 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
6
Annotation release Status Assembly Chr Location
100 current fSalTru1.1 (GCF_901001165.1) 3 NC_042959.1 (56819840..56828156)

Chromosome 3 - NC_042959.1Genomic Context describing neighboring genes Neighboring gene metaxin-1-like Neighboring gene thrombospondin-3a-like Neighboring gene integrin alpha-8-like Neighboring gene girdin-like Neighboring gene ubiquitin carboxyl-terminal hydrolase MINDY-3-like

Genomic regions, transcripts, and products

Genomic Sequence:
NC_042959.1 Chromosome 3 Reference fSalTru1.1 Primary Assembly

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables coreceptor activity IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in BMP signaling pathway IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
PubMed 

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salmo trutta Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSalTru1.1 Primary Assembly

Genomic

  1. NC_042959.1 Reference fSalTru1.1 Primary Assembly

    Range
    56819840..56828156
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029742153.1XP_029598013.1  hemojuvelin-like

    UniProtKB/TrEMBL
    A0A673XE58
    Related
    ENSSTUP00000018691.1, ENSSTUT00000019661.1
    Conserved Domains (2) summary
    pfam06534
    Location:216384
    RGM_C; Repulsive guidance molecule (RGM) C-terminus
    pfam06535
    Location:37211
    RGM_N; Repulsive guidance molecule (RGM) N-terminus
  2. XM_029742162.1XP_029598022.1  hemojuvelin-like

    UniProtKB/TrEMBL
    A0A673XE58
  3. XM_029742144.1XP_029598004.1  hemojuvelin-like

    UniProtKB/TrEMBL
    A0A673XE58