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TNFRSF14-AS1 TNFRSF14 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 115110, updated on 25-Jan-2022

Summary

Official Symbol
TNFRSF14-AS1provided by HGNC
Official Full Name
TNFRSF14 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:26966
See related
AllianceGenome:HGNC:26966
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Broad expression in duodenum (RPKM 15.0), small intestine (RPKM 13.4) and 22 other tissues See more
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Genomic context

See TNFRSF14-AS1 in Genome Data Viewer
Location:
1p36.32
Exon count:
7
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 1 NC_000001.11 (2549920..2557011, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (2481359..2488450, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene pantothenate kinase 4 (inactive) Neighboring gene hes family bHLH transcription factor 5 Neighboring gene TNF receptor superfamily member 14 Neighboring gene uncharacterized LOC100996583 Neighboring gene peroxiredoxin like 2B Neighboring gene membrane metalloendopeptidase like 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Other Names

  • ENST00000416860.2

Clone Names

  • FLJ46690, DKFZp762D186

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_037844.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK021767, AK128532, AL139246

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p13 Primary Assembly

    Range
    2549920..2557011 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p13 ALT_REF_LOCI_1

Genomic

  1. NT_187515.1 Reference GRCh38.p13 ALT_REF_LOCI_1

    Range
    101110..108201 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NR_026927.1: Suppressed sequence

    Description
    NR_026927.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript.
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