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CCDC124 coiled-coil domain containing 124 [ Homo sapiens (human) ]

Gene ID: 115098, updated on 17-Jun-2019

Summary

Official Symbol
CCDC124provided by HGNC
Official Full Name
coiled-coil domain containing 124provided by HGNC
Primary source
HGNC:HGNC:25171
See related
Ensembl:ENSG00000007080
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Ubiquitous expression in fat (RPKM 28.5), kidney (RPKM 22.6) and 25 other tissues See more
Orthologs

Genomic context

See CCDC124 in Genome Data Viewer
Location:
19p13.11
Exon count:
6
Annotation release Status Assembly Chr Location
109.20190607 current GRCh38.p13 (GCF_000001405.39) 19 NC_000019.10 (17933015..17943985)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 19 NC_000019.9 (18043824..18054794)

Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene ribosomal protein L18a Neighboring gene small nucleolar RNA, H/ACA box 68 Neighboring gene solute carrier family 5 member 5 Neighboring gene potassium calcium-activated channel subfamily N member 1 Neighboring gene RNA, 5S ribosomal pseudogene 468 Neighboring gene arrestin domain containing 2

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
RNA binding HDA PubMed 
Process Evidence Code Pubs
cell cycle IEA
Inferred from Electronic Annotation
more info
 
cell division IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
cytosol IDA
Inferred from Direct Assay
more info
 
microtubule organizing center IEA
Inferred from Electronic Annotation
more info
 
midbody IEA
Inferred from Electronic Annotation
more info
 
plasma membrane IDA
Inferred from Direct Assay
more info
 

General protein information

Preferred Names
coiled-coil domain-containing protein 124

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001136203.2NP_001129675.1  coiled-coil domain-containing protein 124

    See identical proteins and their annotated locations for NP_001129675.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1 and 2 encode the same protein.
    Source sequence(s)
    BC013949, BM998230, BQ669035, DB503140
    Consensus CDS
    CCDS12369.1
    UniProtKB/Swiss-Prot
    Q96CT7
    UniProtKB/TrEMBL
    A0A024R7M8
    Related
    ENSP00000408730.1, ENST00000445755.7
    Conserved Domains (1) summary
    pfam06244
    Location:97214
    DUF1014; Protein of unknown function (DUF1014)
  2. NM_138442.3NP_612451.1  coiled-coil domain-containing protein 124

    See identical proteins and their annotated locations for NP_612451.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript. Variants 1 and 2 encode the same protein.
    Source sequence(s)
    BC013949, BG829184, BM998230, BP309483
    Consensus CDS
    CCDS12369.1
    UniProtKB/Swiss-Prot
    Q96CT7
    UniProtKB/TrEMBL
    A0A024R7M8
    Related
    ENSP00000471455.1, ENST00000597436.5
    Conserved Domains (1) summary
    pfam06244
    Location:97214
    DUF1014; Protein of unknown function (DUF1014)

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000019.10 Reference GRCh38.p13 Primary Assembly

    Range
    17933015..17943985
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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