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MYCTH_55132 polyketide synthase [ Thermothelomyces thermophilus ATCC 42464 ]

Gene ID: 11506736, updated on 14-Dec-2023

Summary

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Gene symbol
MYCTH_55132
Gene description
polyketide synthase
Locus tag
MYCTH_55132
Gene type
protein coding
RNA name
polyketide synthase
RefSeq status
PROVISIONAL
Organism
Thermothelomyces thermophilus ATCC 42464 (strain: ATCC 42464, culture-collection: ATCC:42464)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Chaetomiaceae; Thermothelomyces
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Genomic context

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See MYCTH_55132 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
5
Sequence:
Chromosome: 5; NC_016476.1 (803346..811222)

Chromosome 5 - NC_016476.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene oxidoreductase-like protein Neighboring gene oxidoreductase-like protein Neighboring gene glycoside hydrolase family 18 protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_016476.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative genomic analysis of the thermophilic biomass-degrading fungi Myceliophthora thermophila and Thielavia terrestris. Berka RM, et al. Nat Biotechnol, 2011 Oct 2. PMID 21964414

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3-oxoacyl-[acyl-carrier-protein] synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables fatty acid synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphopantetheine binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in secondary metabolite biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polyketide synthase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_016476.1 Reference assembly

    Range
    803346..811222
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003664816.1 → XP_003664864.1  polyketide synthase [Thermothelomyces thermophilus ATCC 42464]

    See identical proteins and their annotated locations for XP_003664864.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    G2QJ44
    Conserved Domains (8) summary
    smart00822
    Location:1937 → 2089
    PKS_KR; This enzymatic domain is part of bacterial polyketide synthases
    smart00823
    Location:2219 → 2299
    PKS_PP; Phosphopantetheine attachment site
    smart00827
    Location:574 → 891
    PKS_AT; Acyl transferase domain in polyketide synthase (PKS) enzymes
    COG0451
    Location:2014 → 2153
    WcaG; Nucleoside-diphosphate-sugar epimerase [Cell wall/membrane/envelope biogenesis]
    COG3321
    Location:6 → 1144
    PksD; Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites biosynthesis, transport and catabolism]
    cd00833
    Location:9 → 441
    PKS; polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or ...
    pfam14765
    Location:965 → 1261
    PS-DH; Polyketide synthase dehydratase
    pfam16197
    Location:407 → 503
    KAsynt_C_assoc; Ketoacyl-synthetase C-terminal extension
Nucleotide Protein
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