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TDEL0G02020 hypothetical protein [ Torulaspora delbrueckii ]

Gene ID: 11504706, updated on 21-Dec-2023

Summary

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Gene symbol
TDEL0G02020
Gene description
hypothetical protein
Locus tag
TDEL_0G02020
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Torulaspora delbrueckii (strain: type strain:CBS 1146)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Torulaspora
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Genomic context

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Location:
chromosome: 7
Exon count:
1
Sequence:
Chromosome: 7; NC_016507.1 (398365..400131, complement)

Chromosome 7 - NC_016507.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L17 Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_016507.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolutionary erosion of yeast sex chromosomes by mating-type switching accidents. Gordon JL, et al. Proc Natl Acad Sci U S A, 2011 Dec 13. PMID 22123960, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables histone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SWI/SNF complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hypothetical protein
XP_003682780.1
  • similar to Saccharomyces cerevisiae SWI3 (YJL176C); ancestral locus Anc_1.163

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_016507.1 Reference assembly

    Range
    398365..400131 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003682732.1 → XP_003682780.1  hypothetical protein TDEL_0G02020 [Torulaspora delbrueckii]

    See identical proteins and their annotated locations for XP_003682780.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    G8ZYU4
    Conserved Domains (4) summary
    COG5259
    Location:43 → 588
    RSC8; RSC chromatin remodeling complex subunit RSC8 [Chromatin structure and dynamics / Transcription]
    cd00167
    Location:309 → 350
    SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...
    pfam04433
    Location:106 → 191
    SWIRM; SWIRM domain
    pfam16495
    Location:432 → 513
    SWIRM-assoc_1; SWIRM-associated region 1
Nucleotide Protein
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