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TTTY4 testis-specific transcript, Y-linked 4 [ Homo sapiens (human) ]

Gene ID: 114761, updated on 23-Nov-2021

Summary

Official Symbol
TTTY4provided by HGNC
Official Full Name
testis-specific transcript, Y-linked 4provided by HGNC
Primary source
HGNC:HGNC:16481
See related
Ensembl:ENSG00000226906 MIM:400037
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
TTY4; TTTY4A; LINC00123; NCRNA00123
Summary
There are three copies of this gene on chromosome Y. This record represents the most centromeric copy. [provided by RefSeq, Jul 2008]
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Genomic context

See TTTY4 in Genome Data Viewer
Location:
Yq11.223
Exon count:
4
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) Y NC_000024.10 (22936455..22973284)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) Y NC_000024.9 (25082602..25119431)

Chromosome Y - NC_000024.10Genomic Context describing neighboring genes Neighboring gene tripartite motif containing 60 pseudogene 4, Y-linked Neighboring gene zinc finger protein 736 pseudogene 11, Y-linked Neighboring gene basic charge Y-linked 2 Neighboring gene tripartite motif containing 60 pseudogene 8, Y-linked

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Other Names

  • long intergenic non-protein coding RNA 123
  • testis-specific transcript, Y-linked 4 (non-protein coding)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_004755.2 

    Range
    1125569..1162398
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. NR_001525.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AF332231
    Related
    ENST00000436568.1

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000024.10 Reference GRCh38.p13 Primary Assembly

    Range
    22936455..22973284
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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