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Actl7b actin-like 7b [ Mus musculus (house mouse) ]

Gene ID: 11471, updated on 1-Mar-2024

Summary

Official Symbol
Actl7bprovided by MGI
Official Full Name
actin-like 7bprovided by MGI
Primary source
MGI:MGI:1343053
See related
Ensembl:ENSMUSG00000070980 AllianceGenome:MGI:1343053
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Tact1; Gm26657
Summary
Located in cytoplasm. Is expressed in male reproductive gland or organ and small intestine. Orthologous to human ACTL7B (actin like 7B). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

See Actl7b in Genome Data Viewer
Location:
4 B3; 4 31.66 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (56740005..56741425, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (56740005..56741425, complement)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 34687 Neighboring gene predicted gene, 26144 Neighboring gene predicted gene, 52740 Neighboring gene actin-like 7a Neighboring gene elongator complex protein 1 Neighboring gene actin binding transcription modulator

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (2) 

General gene information

Markers

Clone Names

  • MGC151192, MGC151194

Gene Ontology Provided by MGI

Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
actin-like protein 7B
Names
T-actin-1
actin-like-7-beta
t-actin 1
testis-specific actin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_025271.2NP_079547.2  actin-like protein 7B

    See identical proteins and their annotated locations for NP_079547.2

    Status: VALIDATED

    Source sequence(s)
    BC116815, BX634818, BY091849
    Consensus CDS
    CCDS18196.1
    UniProtKB/Swiss-Prot
    Q14AJ4, Q9JMI6, Q9QY83
    Related
    ENSMUSP00000092693.4, ENSMUST00000095080.5
    Conserved Domains (2) summary
    smart00268
    Location:52418
    ACTIN; Actin
    cl17037
    Location:53418
    NBD_sugar-kinase_HSP70_actin; Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    56740005..56741425 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)