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LOC11433851 ion channel DMI1 [ Medicago truncatula (barrel medic) ]

Gene ID: 11433851, updated on 7-Dec-2023

Summary

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Gene symbol
LOC11433851
Gene description
ion channel DMI1
Locus tag
MtrunA17_Chr2g0277131
Gene type
protein coding
RefSeq status
MODEL
Organism
Medicago truncatula
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago
Also known as
DMI1
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Genomic context

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Location:
chromosome: 2
Exon count:
12
Annotation release Status Assembly Chr Location
102 current MtrunA17r5.0-ANR (GCF_003473485.1) 2 NC_053043.1 (372559..378663)
101 previous assembly MedtrA17_4.0 (GCF_000219495.3) 2 NC_016408.2 (363898..369984)

Chromosome 2 - NC_053043.1Genomic Context describing neighboring genes Neighboring gene tRNA pseudouridine synthase A Neighboring gene YTH domain-containing protein ECT1 Neighboring gene metallothiol transferase FosB Neighboring gene uncharacterized LOC11425119

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The recent evolution of a symbiotic ion channel in the legume family altered ion conductance and improved functionality in calcium signaling. Venkateshwaran M, et al. Plant Cell, 2012 Jun. PMID 22706284, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in monoatomic ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ion channel DMI1
Names
Does not make infections protein 1
Ion channel POLLUX
ion channel pollux-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Medicago truncatula Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MtrunA17r5.0-ANR Primary Assembly

Genomic

  1. NC_053043.1 Reference MtrunA17r5.0-ANR Primary Assembly

    Range
    372559..378663
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024777209.2 → XP_024632977.1  ion channel DMI1 isoform X2

    UniProtKB/TrEMBL
    A0A072VE48
    Conserved Domains (1) summary
    pfam06241
    Location:491 → 594
    Castor_Poll_mid; Castor and Pollux, part of voltage-gated ion channel

  2. XM_003592883.4 → XP_003592931.1  ion channel DMI1 isoform X1

    See identical proteins and their annotated locations for XP_003592931.1

    UniProtKB/Swiss-Prot
    Q1SKV5, Q6RHR6
    UniProtKB/TrEMBL
    G7IN96
    Conserved Domains (1) summary
    pfam06241
    Location:491 → 594
    Castor_Poll_mid; Castor and Pollux, part of voltage-gated ion channel
Nucleotide Protein
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Gene LinkOut

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Other Literature Sources
Molecular Biology Databases