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abraxas1 abraxas 1, BRCA1 A complex subunit [ Xiphophorus couchianus (Monterrey platyfish) ]

Gene ID: 114150162, updated on 15-Mar-2024

Summary

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Gene symbol
abraxas1
Gene description
abraxas 1, BRCA1 A complex subunit
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus couchianus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
Orthologs
human zebrafish all
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Genomic context

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See abraxas1 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
10
Annotation release Status Assembly Chr Location
101 current X_couchianus-1.0 (GCF_001444195.1) 8 NC_040235.1 (27990290..27995229, complement)

Chromosome 8 - NC_040235.1Genomic Context describing neighboring genes Neighboring gene transcription factor 7-like 1-A Neighboring gene helicase, POLQ like Neighboring gene mitochondrial ribosomal protein S18C Neighboring gene glycerol-3-phosphate acyltransferase 3 Neighboring gene uncharacterized LOC114149178 Neighboring gene NK6 homeobox 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_040235.1 Chromosome 8 Reference X_couchianus-1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables microtubule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables polyubiquitin modification-dependent protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in attachment of spindle microtubules to kinetochore IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic spindle assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein K63-linked deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
BRCA1-A complex subunit Abraxas 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphophorus couchianus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference X_couchianus-1.0 Primary Assembly

Genomic

  1. NC_040235.1 Reference X_couchianus-1.0 Primary Assembly

    Range
    27990290..27995229 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028026439.1 → XP_027882240.1  BRCA1-A complex subunit Abraxas 1 isoform X1

  2. XM_028026440.1 → XP_027882241.1  BRCA1-A complex subunit Abraxas 1 isoform X2

Nucleotide Protein
Heading Accession and Version

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