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mcm4 minichromosome maintenance complex component 4 [ Xiphophorus couchianus (Monterrey platyfish) ]

Gene ID: 114146649, updated on 15-Mar-2024

Summary

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Gene symbol
mcm4
Gene description
minichromosome maintenance complex component 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus couchianus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
Orthologs
human zebrafish all
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Genomic context

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See mcm4 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
17
Annotation release Status Assembly Chr Location
101 current X_couchianus-1.0 (GCF_001444195.1) 6 NC_040233.1 (17068885..17077388)

Chromosome 6 - NC_040233.1Genomic Context describing neighboring genes Neighboring gene microtubule-associated protein, RP/EB family, member 2 Neighboring gene scaffold protein involved in DNA repair Neighboring gene CCAAT enhancer binding protein delta Neighboring gene ubiquitin-conjugating enzyme E2 variant 2 Neighboring gene snail family zinc finger 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_040233.1 Chromosome 6 Reference X_couchianus-1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables single-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables single-stranded DNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA replication IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in DNA strand elongation involved in DNA replication IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in DNA unwinding involved in DNA replication IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in double-strand break repair via break-induced replication IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic DNA replication initiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of MCM complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA replication licensing factor MCM4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphophorus couchianus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference X_couchianus-1.0 Primary Assembly

Genomic

  1. NC_040233.1 Reference X_couchianus-1.0 Primary Assembly

    Range
    17068885..17077388
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028020936.1 → XP_027876737.1  DNA replication licensing factor MCM4

    UniProtKB/TrEMBL
    A0A3B5M797
    Conserved Domains (3) summary
    smart00350
    Location:271 → 774
    MCM; minichromosome maintenance proteins
    pfam05109
    Location:1 → 151
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam14551
    Location:170 → 268
    MCM_N; MCM N-terminal domain
Nucleotide Protein
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