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stx6 syntaxin 6 [ Xiphophorus couchianus (Monterrey platyfish) ]

Gene ID: 114141420, updated on 22-Jul-2025
Gene symbol
stx6
Gene description
syntaxin 6
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus couchianus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
Orthologs
human zebrafish all
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See stx6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2025_07 current X_couchianus-1.0 (GCF_001444195.1) Unplaced Scaffold NW_020963015.1 (1747660..1752395, complement)

NW_020963015.1Genomic Context describing neighboring genes Neighboring gene glutamate receptor, ionotropic, N-methyl-D-aspartate 3Bb Neighboring gene uncharacterized LOC114141441 Neighboring gene uncharacterized LOC114141418 Neighboring gene WD repeat domain 18 Neighboring gene ELAV-like protein 1

Genomic Sequence:
NW_020963015 Unplaced Scaffold Reference X_couchianus-1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables SNAP receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi vesicle transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
syntaxin-6

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RefSeqs of Annotated Genomes: GCF_001444195.1-RS_2025_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference X_couchianus-1.0 Primary Assembly

Genomic

  1. NW_020963015.1 Reference X_couchianus-1.0 Primary Assembly

    Range
    1747660..1752395 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028011965.1 → XP_027867766.1  syntaxin-6

    UniProtKB/TrEMBL
    A0A3B5LS88
    Conserved Domains (2) summary
    cd15851
    Location:167 → 231
    SNARE_Syntaxin6; SNARE motif of syntaxin 6
    pfam09177
    Location:13 → 103
    Syntaxin-6_N; Syntaxin 6, N-terminal
Nucleotide Protein
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