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LOC114139037 ribonuclease H2 subunit C-like [ Xiphophorus couchianus (Monterrey platyfish) ]

Gene ID: 114139037, updated on 21-Dec-2023

Summary

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Gene symbol
LOC114139037
Gene description
ribonuclease H2 subunit C-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus couchianus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
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Genomic context

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See LOC114139037 in Genome Data Viewer
Location:
chromosome: 23
Exon count:
6
Annotation release Status Assembly Chr Location
101 current X_couchianus-1.0 (GCF_001444195.1) 23 NC_040250.1 (13287549..13289590)

Chromosome 23 - NC_040250.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114139405 Neighboring gene inositol-trisphosphate 3-kinase B-like Neighboring gene seipin-like Neighboring gene zinc finger and BTB domain containing 3 Neighboring gene uncharacterized LOC114139038 Neighboring gene ribonuclease H2 subunit C-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_040250.1 Chromosome 23 Reference X_couchianus-1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in RNA catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of ribonuclease H2 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ribonuclease H2 subunit C-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphophorus couchianus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference X_couchianus-1.0 Primary Assembly

Genomic

  1. NC_040250.1 Reference X_couchianus-1.0 Primary Assembly

    Range
    13287549..13289590
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028008652.1 → XP_027864453.1  ribonuclease H2 subunit C-like isoform X1

    UniProtKB/TrEMBL
    A0A3B5KPE8
    Conserved Domains (1) summary
    cd09271
    Location:35 → 119
    RNase_H2-C; Ribonuclease H2-C is a subunit of the eukaryotic RNase H complex which cleaves RNA-DNA hybrids

  2. XM_028008654.1 → XP_027864455.1  ribonuclease H2 subunit C-like isoform X2

    UniProtKB/TrEMBL
    A0A3B5KPE8
    Conserved Domains (1) summary
    cd09271
    Location:24 → 108
    RNase_H2-C; Ribonuclease H2-C is a subunit of the eukaryotic RNase H complex which cleaves RNA-DNA hybrids
Nucleotide Protein
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