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prim2 DNA primase subunit 2 [ Xiphophorus couchianus (Monterrey platyfish) ]

Gene ID: 114137778, updated on 11-Apr-2024

Summary

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Gene symbol
prim2
Gene description
DNA primase subunit 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus couchianus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
Orthologs
human zebrafish all
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Genomic context

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See prim2 in Genome Data Viewer
Location:
chromosome: 22
Exon count:
14
Annotation release Status Assembly Chr Location
101 current X_couchianus-1.0 (GCF_001444195.1) 22 NC_040249.1 (13942347..13967804)

Chromosome 22 - NC_040249.1Genomic Context describing neighboring genes Neighboring gene BCL2 associated athanogene 2 Neighboring gene RAB23, member RAS oncogene family Neighboring gene KH domain containing, RNA binding, signal transduction associated 2 Neighboring gene isoaspartyl peptidase/L-asparaginase-like Neighboring gene uncharacterized LOC114137898

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_040249.1 Chromosome 22 Reference X_couchianus-1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in DNA replication, synthesis of primer IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of alpha DNA polymerase:primase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA primase large subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphophorus couchianus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference X_couchianus-1.0 Primary Assembly

Genomic

  1. NC_040249.1 Reference X_couchianus-1.0 Primary Assembly

    Range
    13942347..13967804
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028006594.1 → XP_027862395.1  DNA primase large subunit

    UniProtKB/TrEMBL
    A0A3B5LXR7
    Conserved Domains (1) summary
    cd07322
    Location:25 → 446
    PriL_PriS_Eukaryotic; Eukaryotic core primase: Large subunit, PriL
Nucleotide Protein
Heading Accession and Version

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