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B4GALNT3 beta-1,4-N-acetyl-galactosaminyltransferase 3 [ Vombatus ursinus (common wombat) ]

Gene ID: 114039560, updated on 15-Mar-2024

Summary

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Gene symbol
B4GALNT3
Gene description
beta-1,4-N-acetyl-galactosaminyltransferase 3
See related
Ensembl:ENSVURG00010005684
Gene type
protein coding
RefSeq status
MODEL
Organism
Vombatus ursinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Diprotodontia; Vombatidae; Vombatus
Orthologs
human mouse all
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Genomic context

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See B4GALNT3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
20
Annotation release Status Assembly Chr Location
100 current bare-nosed wombat genome assembly (GCF_900497805.2) Unplaced Scaffold NW_020951860.1 (641861..790427)

NW_020951860.1Genomic Context describing neighboring genes Neighboring gene lysine demethylase 5A Neighboring gene vesicle-trafficking protein SEC22a pseudogene Neighboring gene coiled-coil domain containing 77 Neighboring gene caveolae-associated protein 3 pseudogene Neighboring gene ninjurin 2 Neighboring gene protein limb expression 1 homolog

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020951860 Unplaced Scaffold Reference bare-nosed wombat genome assembly Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi cisterna membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-N-acetylgalactosaminyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vombatus ursinus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bare-nosed wombat genome assembly Primary Assembly

Genomic

  1. NW_020951860.1 Reference bare-nosed wombat genome assembly Primary Assembly

    Range
    641861..790427
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027857354.1 → XP_027713155.1  beta-1,4-N-acetylgalactosaminyltransferase 3

    UniProtKB/TrEMBL
    A0A4X2KDG1, A0A4X2KDV5
    Related
    ENSVURP00010007370.1, ENSVURT00010008330.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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