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LINC00313 long intergenic non-protein coding RNA 313 [ Homo sapiens (human) ]

Gene ID: 114038, updated on 23-Nov-2021

Summary

Official Symbol
LINC00313provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 313provided by HGNC
Primary source
HGNC:HGNC:16416
See related
Ensembl:ENSG00000185186
Gene type
ncRNA
RefSeq status
PREDICTED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
C21orf84; NCRNA00313; CH507-42P11.5
Expression
Broad expression in adrenal (RPKM 1.4), liver (RPKM 1.3) and 18 other tissues See more
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Genomic context

See LINC00313 in Genome Data Viewer
Location:
21q22.3
Exon count:
4
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 21 NC_000021.9 (43462094..43478223, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 21 NC_000021.8 (44881974..44898103, complement)

Chromosome 21 - NC_000021.9Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107987302 Neighboring gene SIK1-LINC00319 intergenic CAGE-defined high expression enhancer Neighboring gene long intergenic non-protein coding RNA 319 Neighboring gene uncharacterized LOC102723380 Neighboring gene heat shock transcription factor 2 binding protein Neighboring gene Sharpr-MPRA regulatory region 2841 Neighboring gene Sharpr-MPRA regulatory region 13752

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_026863.1 RNA Sequence

    Status: PREDICTED

    Source sequence(s)
    AF426261
    Related
    ENST00000332440.4

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000021.9 Reference GRCh38.p13 Primary Assembly

    Range
    43462094..43478223 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_153752.1: Suppressed sequence

    Description
    NM_153752.1: This RefSeq was permanently suppressed because currently there is support for the transcript but not for the protein.
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