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B4GALNT3 beta-1,4-N-acetyl-galactosaminyltransferase 3 [ Bos indicus x Bos taurus (hybrid cattle) ]

Gene ID: 113892294, updated on 15-Mar-2024

Summary

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Gene symbol
B4GALNT3
Gene description
beta-1,4-N-acetyl-galactosaminyltransferase 3
See related
Ensembl:ENSBIXG00005023310
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos indicus x Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See B4GALNT3 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
20
Annotation release Status Assembly Chr Location
100 current UOA_Brahman_1 (GCF_003369695.1) 5 NC_040080.1 (12623711..12721400, complement)

Chromosome 5 - NC_040080.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC113892291 Neighboring gene ninjurin 2 Neighboring gene transfer RNA glutamic acid (anticodon CUC) Neighboring gene uncharacterized LOC113892293 Neighboring gene uncharacterized LOC113892918 Neighboring gene small nucleolar RNA SNORA70 Neighboring gene coiled-coil domain containing 77 Neighboring gene lysine demethylase 5A Neighboring gene 60S ribosomal protein L27a pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_040080.1 Chromosome 5 Reference UOA_Brahman_1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi cisterna membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-N-acetylgalactosaminyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bos indicus x Bos taurus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UOA_Brahman_1

Genomic

  1. NC_040080.1 Reference UOA_Brahman_1

    Range
    12623711..12721400 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027541001.1 → XP_027396802.1  beta-1,4-N-acetylgalactosaminyltransferase 3 isoform X2

    UniProtKB/TrEMBL
    A0A4W2E333

  2. XM_027541000.1 → XP_027396801.1  beta-1,4-N-acetylgalactosaminyltransferase 3 isoform X1

    UniProtKB/TrEMBL
    A0A4W2E333, A0A4W2GQK4
    Related
    ENSBIXP00005020175.1, ENSBIXT00005033416.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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