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FAM83F family with sequence similarity 83 member F [ Homo sapiens (human) ]

Gene ID: 113828, updated on 1-Aug-2020

Summary

Official Symbol
FAM83Fprovided by HGNC
Official Full Name
family with sequence similarity 83 member Fprovided by HGNC
Primary source
HGNC:HGNC:25148
See related
Ensembl:ENSG00000133477
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in testis (RPKM 11.4), skin (RPKM 5.5) and 12 other tissues See more
Orthologs

Genomic context

See FAM83F in Genome Data Viewer
Location:
22q13.1
Exon count:
5
Annotation release Status Assembly Chr Location
109.20200522 current GRCh38.p13 (GCF_000001405.39) 22 NC_000022.11 (39994954..40043534)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 22 NC_000022.10 (40390953..40426043)

Chromosome 22 - NC_000022.11Genomic Context describing neighboring genes Neighboring gene ENTH domain containing 1 Neighboring gene ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 pseudogene 1 Neighboring gene translation machinery-associated protein 7 pseudogene Neighboring gene GRB2 related adaptor protein 2 Neighboring gene uncharacterized LOC114841040 Neighboring gene trinucleotide repeat containing adaptor 6B Neighboring gene ribosomal protein L7 pseudogene 52 Neighboring gene SGSM3 antisense RNA 1 Neighboring gene adenylosuccinate lyase Neighboring gene small G protein signaling modulator 3

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • FLJ44317

Gene Ontology Provided by GOA

Function Evidence Code Pubs
protein kinase binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
signal transduction IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_138435.4NP_612444.2  protein FAM83F

    See identical proteins and their annotated locations for NP_612444.2

    Status: VALIDATED

    Source sequence(s)
    KF457465, Z82206, Z83847
    Consensus CDS
    CCDS14000.2
    UniProtKB/Swiss-Prot
    Q8NEG4
    Related
    ENSP00000330432.5, ENST00000333407.11
    Conserved Domains (2) summary
    cd09186
    Location:20295
    PLDc_FAM83F_N; N-terminal phospholipase D-like domain of the uncharacterized protein, Family with sequence similarity 83F
    pfam13091
    Location:154291
    PLDc_2; PLD-like domain

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109.20200522

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000022.11 Reference GRCh38.p13 Primary Assembly

    Range
    39994954..40043534
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NR_039988.1: Suppressed sequence

    Description
    NR_039988.1: This RefSeq was removed because the gene was discontinued.
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