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TUBA3FP tubulin alpha 3f pseudogene [ Homo sapiens (human) ]

Gene ID: 113691, updated on 25-Oct-2022

Summary

Official Symbol
TUBA3FPprovided by HGNC
Official Full Name
tubulin alpha 3f pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:24067
See related
Ensembl:ENSG00000284130 AllianceGenome:HGNC:24067
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Broad expression in testis (RPKM 2.0), brain (RPKM 1.0) and 20 other tissues See more
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Genomic context

See TUBA3FP in Genome Data Viewer
Location:
22q11.21
Exon count:
3
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 22 NC_000022.11 (21008203..21014287, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 22 NC_060946.1 (21416977..21423061, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 22 NC_000022.10 (21362492..21368576, complement)

Chromosome 22 - NC_000022.11Genomic Context describing neighboring genes Neighboring gene leucine zipper like transcription regulator 1 Neighboring gene THAP domain containing 7 Neighboring gene THAP7 antisense RNA 1 Neighboring gene purinergic receptor P2X 6 Neighboring gene solute carrier family 7 member 4 Neighboring gene microRNA 649

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Pathways from PubChem

General gene information

Markers

Other Names

  • tubulin, alpha pseudogene

Clone Names

  • MGC16703

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_003608.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK057257, BC009991, BI668929, CN368433
    Related
    ENST00000422086.5

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000022.11 Reference GRCh38.p14 Primary Assembly

    Range
    21008203..21014287 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060946.1 Alternate T2T-CHM13v2.0

    Range
    21416977..21423061 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)