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LOC113685608 ras-related protein rab7 [ Pocillopora damicornis ]

Gene ID: 113685608, updated on 21-Dec-2023

Summary

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Gene symbol
LOC113685608
Gene description
ras-related protein rab7
Locus tag
pdam_00023154
See related
EnsemblRapid:LOC113685608
Gene type
protein coding
RefSeq status
MODEL
Organism
Pocillopora damicornis
Lineage
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Scleractinia; Astrocoeniina; Pocilloporidae; Pocillopora
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current ASM370409v1 (GCF_003704095.1) Unplaced Scaffold NW_020847592.1 (36784..43341)

NW_020847592.1Genomic Context describing neighboring genes Neighboring gene CUB and zona pellucida-like domain-containing protein 1 Neighboring gene uncharacterized LOC113685609 Neighboring gene 5-hydroxytryptamine receptor 1A-like Neighboring gene melanocortin receptor 4-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020847592 Unplaced Scaffold Reference ASM370409v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endosome to lysosome transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phagosome-lysosome fusion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in late endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in phagocytic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ras-related protein rab7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pocillopora damicornis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM370409v1 Primary Assembly

Genomic

  1. NW_020847592.1 Reference ASM370409v1 Primary Assembly

    Range
    36784..43341
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027203140.1 → XP_027058941.1  ras-related protein rab7 isoform X2

    UniProtKB/TrEMBL
    A0A3M6US59
    Related
    XP_027058941.1, XM_027203140.1
    Conserved Domains (1) summary
    cd01862
    Location:9 → 179
    Rab7; Rab GTPase family 7 (Rab7)

  2. XM_027203139.1 → XP_027058940.1  ras-related protein rab7 isoform X1

    Related
    XP_027058940.1, XM_027203139.1
Nucleotide Protein
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Molecular Biology Databases